RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	CSRNP2	Q9H175	543 aa		6.25	□□□□□ -1.41
PCM1-223	ENST00000524356	CBFA2T2	O43439	604 aa		6.24	□□□□□ -1.41
PCM1-223	ENST00000524356	ZNF165	P49910	485 aa		6.24	□□□□□ -1.41
PCM1-223	ENST00000524356	LRCH2	Q5VUJ6	765 aa		6.24	□□□□□ -1.41
PCM1-223	ENST00000524356	KLHL36	Q8N4N3	616 aa		6.24	□□□□□ -1.41
PCM1-223	ENST00000524356	DRC1	Q96MC2	740 aa		6.24	□□□□□ -1.41
PCM1-223	ENST00000524356	AP5M1	Q9H0R1	490 aa		6.24	□□□□□ -1.41
PCM1-223	ENST00000524356	ADAMTS1	Q9UHI8	967 aa		6.24	□□□□□ -1.41
PCM1-223	ENST00000524356	IFT140	Q96RY7	1462 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	TDRD9	Q8NDG6	1382 aa	Known RBP	6.23	□□□□□ -1.41
PCM1-223	ENST00000524356		A0A087WZG4	1122 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	ANKRD33B	A6NCL7	494 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	PLSCR1	O15162	318 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	SEPHS1	P49903	392 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	XPC	Q01831	940 aa	Predicted RBP	6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	LSM12	Q3MHD2	195 aa	Known RBP	6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	HS1BP3	Q53T59	392 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	TCTN3	Q6NUS6	607 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	LDLRAD3	Q86YD5	345 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	GIPC2	Q8TF65	315 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	EXTL1	Q92935	676 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	VOPP1	Q96AW1	172 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	CRAMP1	Q96RY5	1269 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	BCL2L13	Q9BXK5	485 aa		6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	DIS3	Q9Y2L1	958 aa	Known RBP	6.23	□□□□□ -1.41
PCM1-223	ENST00000524356	VAMP4	O75379	141 aa		6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	CNOT4	O95628	575 aa	Known RBP	6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	ERCC3	P19447	782 aa		6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	LMO1	P25800	156 aa		6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	CANX	P27824	592 aa	Known RBP	6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	APOBR	Q0VD83	1088 aa		6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	NFATC3	Q12968	1075 aa		6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	ZYX	Q15942	572 aa	Known RBP	6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	MBLAC2	Q68D91	279 aa		6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	NEU4	Q8WWR8	484 aa	Predicted RBP	6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	DPF3	Q92784	378 aa		6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	ZG16B	Q96DA0	208 aa		6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	BACE2	Q9Y5Z0	518 aa		6.22	□□□□□ -1.41
PCM1-223	ENST00000524356	NPHP3-ACAD11	A0A0J9YXS1	232 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	C2orf71	A6NGG8	1288 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	NPHS1	O60500	1241 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	PPFIA2	O75334	1257 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	PAM	P19021	973 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	ATXN1	P54253	815 aa	Known RBP	6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	DPY19L1	Q2PZI1	675 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	SCUBE1	Q8IWY4	988 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	ADCY4	Q8NFM4	1077 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	SEC14L1	Q92503	715 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	POLR3GL	Q9BT43	218 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	MARCH2	Q9P0N8	246 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	ZDHHC9	Q9Y397	364 aa		6.21	□□□□□ -1.42
PCM1-223	ENST00000524356	TOPBP1	Q92547	1522 aa		6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	RSF1	Q96T23	1441 aa	Predicted RBP	6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	SORBS3	O60504	671 aa		6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	NKX3-2	P78367	333 aa		6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	PCSK4	Q6UW60	755 aa		6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	MILR1	Q7Z6M3	343 aa		6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	SLITRK4	Q8IW52	837 aa		6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	TAB3	Q8N5C8	712 aa	Predicted RBP	6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	AGAP2	Q99490	1192 aa		6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	FTSJ1	Q9UET6	329 aa		6.2	□□□□□ -1.42
PCM1-223	ENST00000524356	IL12RB1	P42701	662 aa		6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	DPY19L2P1	Q6NXN4	242 aa		6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	TEX2	Q8IWB9	1127 aa		6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	EDA	Q92838	391 aa		6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	CLIC6	Q96NY7	704 aa		6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	BARX1	Q9HBU1	254 aa	Predicted RBP	6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	NGRN	Q9NPE2	291 aa	Known RBP	6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	ADAM29	Q9UKF5	820 aa		6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	CROT	Q9UKG9	612 aa		6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	RAD54L2	Q9Y4B4	1467 aa		6.19	□□□□□ -1.42
PCM1-223	ENST00000524356	RECK	O95980	971 aa		6.18	□□□□□ -1.42
PCM1-223	ENST00000524356	THBD	P07204	575 aa		6.18	□□□□□ -1.42
PCM1-223	ENST00000524356	SLC6A11	P48066	632 aa		6.18	□□□□□ -1.42
PCM1-223	ENST00000524356	ZC3H6	P61129	1189 aa	Known RBP	6.18	□□□□□ -1.42
PCM1-223	ENST00000524356	NKD1	Q969G9	470 aa		6.18	□□□□□ -1.42
PCM1-223	ENST00000524356	SEC61A2	Q9H9S3	476 aa		6.18	□□□□□ -1.42
PCM1-223	ENST00000524356	VTI1B	Q9UEU0	232 aa		6.18	□□□□□ -1.42
PCM1-223	ENST00000524356	ZNRF3	Q9ULT6	936 aa		6.18	□□□□□ -1.42
PCM1-223	ENST00000524356	TRBV23OR9-2	A0A075B6M9	112 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	C1S	P09871	688 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	COL6A1	P12109	1028 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	VAMP1	P23763	118 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	TCEAL1	Q15170	157 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	AGBL4	Q5VU57	503 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	UNC5A	Q6ZN44	842 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	UBXN4	Q92575	508 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	WHRN	Q9P202	907 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	ZNF214	Q9UL59	606 aa	Predicted RBP	6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	WASF3	Q9UPY6	502 aa		6.17	□□□□□ -1.42
PCM1-223	ENST00000524356	CHD1	O14646	1710 aa		6.16	□□□□□ -1.42
PCM1-223	ENST00000524356	CCDC88B	A6NC98	1476 aa		6.16	□□□□□ -1.42
PCM1-223	ENST00000524356	EIF4G3	O43432	1585 aa	Known RBP	6.16	□□□□□ -1.42
PCM1-223	ENST00000524356	NAALADL2	Q58DX5	795 aa		6.16	□□□□□ -1.42
PCM1-223	ENST00000524356	TRMT10B	Q6PF06	316 aa	Known RBP	6.16	□□□□□ -1.42
PCM1-223	ENST00000524356	NUDT10	Q8NFP7	164 aa		6.16	□□□□□ -1.42
PCM1-223	ENST00000524356	NUDT11	Q96G61	164 aa		6.16	□□□□□ -1.42
PCM1-223	ENST00000524356	LRRC37B	Q96QE4	947 aa		6.16	□□□□□ -1.42
PCM1-223	ENST00000524356	LMF1	Q96S06	567 aa		6.16	□□□□□ -1.42
PCM1-223	ENST00000524356	HAUS7	Q99871	368 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms