RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 DDX19BQ9UMR2 479 aa10.95□□□□□ -0.66
PTPN12-216ENST00000523952 PLXNA3P51805 1871 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 RSPH10B2B2RC85 870 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 STXBP3O00186 592 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 SMARCA5O60264 1052 aaPredicted RBP10.94□□□□□ -0.66
PTPN12-216ENST00000523952 NMT2O60551 498 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 GFRA3O60609 400 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 ARIH2O95376 493 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 RSPH10BP0C881 870 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 CTNNB1P35222 781 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 THPOP40225 353 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 CTDSPL2Q05D32 466 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 GPNMBQ14956 572 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 LY6KQ17RY6 165 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 KIAA0753Q2KHM9 967 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 TCTN1Q2MV58 587 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 USH1GQ495M9 461 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 FBXO11Q86XK2 927 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 RNF135Q8IUD6 432 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 DBF4BQ8NFT6 615 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 SEPT8Q92599 483 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 ANKS1AQ92625 1134 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 PHOX2BQ99453 314 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 SPTBN4Q9H254 2564 aa10.94□□□□□ -0.66
PTPN12-216ENST00000523952 MYO10Q9HD67 2058 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 COL4A6Q14031 1691 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 CSPG5O95196 566 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 ZNF286BP0CG31 522 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 EDNRBP24530 442 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 HTRA4P83105 476 aaPredicted RBP10.93□□□□□ -0.66
PTPN12-216ENST00000523952 FOXK2Q01167 660 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 ARHGAP1Q07960 439 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 SMAD2Q15796 467 aaKnown RBP10.93□□□□□ -0.66
PTPN12-216ENST00000523952 STXBP2Q15833 593 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 HERC4Q5GLZ8 1057 aaPredicted RBP10.93□□□□□ -0.66
PTPN12-216ENST00000523952 RRP12Q5JTH9 1297 aaKnown RBP10.93□□□□□ -0.66
PTPN12-216ENST00000523952 BTNL9Q6UXG8 535 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 PRSS33Q8NF86 280 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 CLEC4DQ8WXI8 215 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 EDAQ92838 391 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 PPP2R3CQ969Q6 453 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 IFIH1Q9BYX4 1025 aaKnown RBP10.93□□□□□ -0.66
PTPN12-216ENST00000523952 IRF2BPLQ9H1B7 796 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 IGFLR1Q9H665 355 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 IL17RBQ9NRM6 502 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 USP34Q70CQ2 3546 aa10.93□□□□□ -0.66
PTPN12-216ENST00000523952 TMEM221A6NGB7 291 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 M0R296 226 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 MBTPS2O43462 519 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 TOP1P11387 765 aaKnown RBP10.92□□□□□ -0.66
PTPN12-216ENST00000523952 NDUFV1P49821 464 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 SMAD4Q13485 552 aaKnown RBP10.92□□□□□ -0.66
PTPN12-216ENST00000523952 LAMC2Q13753 1193 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 SIRT2Q8IXJ6 389 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 FIBCD1Q8N539 461 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 NSUN6Q8TEA1 469 aaKnown RBP10.92□□□□□ -0.66
PTPN12-216ENST00000523952 KAT2BQ92831 832 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 CTAGE1Q96RT6 745 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 FSD1Q9BTV5 496 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 C11orf84Q9BUA3 381 aaPredicted RBP10.92□□□□□ -0.66
PTPN12-216ENST00000523952 LMAN2LQ9H0V9 348 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 CD207Q9UJ71 328 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 RWDD3Q9Y3V2 267 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 MRVI1Q9Y6F6 885 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 LAMA4Q16363 1823 aa10.92□□□□□ -0.66
PTPN12-216ENST00000523952 WDR19Q8NEZ3 1342 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 TTC3P53804 2025 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 MBTPS1Q14703 1052 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 PLEKHG4Q58EX7 1191 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 ARHGEF16Q5VV41 709 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 CCDC62Q6P9F0 684 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 TRIM67Q6ZTA4 783 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 ATOH1Q92858 354 aaPredicted RBP10.91□□□□□ -0.66
PTPN12-216ENST00000523952 ATP6V0A1Q93050 837 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 IL17RAQ96F46 866 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 RMDN3Q96TC7 470 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 SEC62Q99442 399 aaKnown RBP10.91□□□□□ -0.66
PTPN12-216ENST00000523952 CFAP54Q96N23 3096 aa10.91□□□□□ -0.66
PTPN12-216ENST00000523952 C17orf102A2RUQ5 167 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 CCER2I3L3R5 266 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 DHX16O60231 1041 aaKnown RBP10.9□□□□□ -0.66
PTPN12-216ENST00000523952 F2P00734 622 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 RB1P06400 928 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 ZNF200P98182 395 aaPredicted RBP10.9□□□□□ -0.66
PTPN12-216ENST00000523952 IER5LQ5T953 404 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 TSHZ3Q63HK5 1081 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 BMP8AQ7Z5Y6 402 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 MCF2L2Q86YR7 1114 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 FBXL6Q8N531 539 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 PPTC7Q8NI37 304 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 TOP1MTQ969P6 601 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 IWS1Q96ST2 819 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 TMEM47Q9BQJ4 181 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 INCENPQ9NQS7 918 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 FAM86C1Q9NVL1 165 aa10.9□□□□□ -0.66
PTPN12-216ENST00000523952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTPN12-216ENST00000523952 FNDC1Q4ZHG4 1894 aaPredicted RBP10.89□□□□□ -0.67
PTPN12-216ENST00000523952 ABCB11O95342 1321 aa10.89□□□□□ -0.67
PTPN12-216ENST00000523952 SORBS3O60504 671 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms