RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 PLCB3Q01970 1234 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 USP4Q13107 963 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 SERINC3Q13530 473 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 SNX1Q13596 522 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 CUL3Q13618 768 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 LRP8Q14114 963 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 STK11Q15831 433 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 SNCBQ16143 134 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 CCDC40Q4G0X9 1142 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 HECTD3Q5T447 861 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 NUTM2DQ5VT03 806 aaPredicted RBP7.19□□□□□ -1.26
SDC2-208ENST00000523877 TWF2Q6IBS0 349 aaKnown RBP7.19□□□□□ -1.26
SDC2-208ENST00000523877 CNSTQ6PJW8 725 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 BICDL1Q6ZP65 573 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 CEP128Q6ZU80 1094 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 LAPTM4BQ86VI4 370 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 FAM9CQ8IZT9 166 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 DHX58Q96C10 678 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 CGREF1Q99674 301 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 BEGAINQ9BUH8 593 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 BICC1Q9H694 974 aaKnown RBP7.19□□□□□ -1.26
SDC2-208ENST00000523877 PSTPIP2Q9H939 334 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 PANK3Q9H999 370 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 NCOA5Q9HCD5 579 aaKnown RBP7.19□□□□□ -1.26
SDC2-208ENST00000523877 ATP13A1Q9HD20 1204 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 ANKEF1Q9NU02 776 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 TBC1D22BQ9NU19 505 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.19□□□□□ -1.26
SDC2-208ENST00000523877 HPF1Q9NWY4 346 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 AATFQ9NY61 560 aaKnown RBP eCLIP7.19□□□□□ -1.26
SDC2-208ENST00000523877 NKIRAS2Q9NYR9 191 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 MTRRQ9UBK8 725 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 HPCAL4Q9UM19 191 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 TMX2Q9Y320 296 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 ITIH6Q6UXX5 1313 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 NPC1L1Q9UHC9 1359 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 SNAPC4Q5SXM2 1469 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 MAPKBP1O60336 1514 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 DNMBPQ6XZF7 1577 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 FAM221BA6H8Z2 402 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 RSPH10B2B2RC85 870 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 ALG1L2C9J202 215 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 M0R2C6 588 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 NVLO15381 856 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 NCAM2O15394 837 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 HOXC11O43248 304 aaPredicted RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 RANBP6O60518 1105 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 GFPT2O94808 682 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 RSPH10BP0C881 870 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 DLATP10515 647 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 POLR2EP19388 210 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 SFPQP23246 707 aaKnown RBP eCLIP7.18□□□□□ -1.26
SDC2-208ENST00000523877 PSMC4P43686 418 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 CCT5P48643 541 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 SEPHS1P49903 392 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 SCNN1DP51172 638 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 MCL1Q07820 350 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 DDR1Q08345 913 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 KLHL30Q0D2K2 578 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 TRIM28Q13263 835 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 SAFBQ15424 915 aaKnown RBP eCLIP7.18□□□□□ -1.26
SDC2-208ENST00000523877 MAPRE2Q15555 327 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 CCDC153Q494R4 210 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 VPS53Q5VIR6 699 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 INTS3Q68E01 1043 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 FAM180BQ6P0A1 224 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 POMZP3Q6PJE2 187 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 ARHGAP27Q6ZUM4 889 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 SH3BP5LQ7L8J4 393 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 KIAA0907Q7Z7F0 614 aaPredicted RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 ZNF598Q86UK7 904 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 DIS3LQ8TF46 1054 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 DYDC1Q8WWB3 177 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 FATE1Q969F0 183 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 NUDT16L1Q9BRJ7 211 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 AGXT2Q9BYV1 514 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 ZSCAN16Q9H4T2 348 aaPredicted RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 ELAC1Q9H777 363 aaKnown RBP7.18□□□□□ -1.26
SDC2-208ENST00000523877 CYP4F12Q9HCS2 524 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 MRS2Q9HD23 443 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 BLOC1S4Q9NUP1 217 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 MOCS1Q9NZB8 636 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 ZIM2Q9NZV7 527 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 DISP3Q9P2K9 1392 aa7.18□□□□□ -1.26
SDC2-208ENST00000523877 DIP2BQ9P265 1576 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 GOLGA6L7A0A1B0GV03 622 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 LCE2BO14633 110 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 ENC1O14682 589 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 SLC7A4O43246 635 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 IFIT1P09914 478 aaKnown RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 GARTP22102 1010 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 S100A1P23297 94 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 PBLDP30039 288 aaPredicted RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 HOXC12P31275 282 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 MAN2A2P49641 1150 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 CLNS1AP54105 237 aaKnown RBP7.17□□□□□ -1.26
SDC2-208ENST00000523877 OXCT1P55809 520 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 OLR1P78380 273 aa7.17□□□□□ -1.26
SDC2-208ENST00000523877 EN1Q05925 392 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms