RNA–Protein interactions for RNA: ENST00000523262.5

CSGALNACT1-213, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-213ENST00000523262 HAS3O00219 553 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 ZBTB5O15062 677 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 SORBS3O60504 671 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 LPXNO60711 386 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 ZNF618Q5T7W0 954 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 FAM117BQ6P1L5 589 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 SPRED2Q7Z698 418 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 STAG2Q8N3U4 1231 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 PDCD2LQ9BRP1 358 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 EMSYQ7Z589 1322 aa18.45■□□□□ 0.54
CSGALNACT1-213ENST00000523262 GGPS1O95749 300 aa18.44■□□□□ 0.54
CSGALNACT1-213ENST00000523262 NUCB1Q02818 461 aa18.44■□□□□ 0.54
CSGALNACT1-213ENST00000523262 TRDNQ13061 729 aa18.44■□□□□ 0.54
CSGALNACT1-213ENST00000523262 CELF3Q5SZQ8 465 aaKnown RBP18.44■□□□□ 0.54
CSGALNACT1-213ENST00000523262 MYSM1Q5VVJ2 828 aa18.44■□□□□ 0.54
CSGALNACT1-213ENST00000523262 STOX1Q6ZVD7 989 aa18.44■□□□□ 0.54
CSGALNACT1-213ENST00000523262 FAM122AQ96E09 287 aa18.44■□□□□ 0.54
CSGALNACT1-213ENST00000523262 MLXIPQ9HAP2 919 aa18.44■□□□□ 0.54
CSGALNACT1-213ENST00000523262 LINC01553A4QN01 128 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 GCOM1H8Y6P7 765 aaPredicted RBP18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 OPLAHO14841 1288 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 LGR5O75473 907 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 AMHP03971 560 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 POLR2MP0CAP2 368 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 TGFB3P10600 412 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 HOXD8P13378 290 aaPredicted RBP18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 CCND2P30279 289 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 HOXA13P31271 388 aaPredicted RBP18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 ERVK-21P61565 698 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 ZNF200P98182 395 aaPredicted RBP18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 GHRHRQ02643 423 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 PGM5Q15124 567 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 TRIM71Q2Q1W2 868 aaKnown RBP18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 HSDL1Q3SXM5 330 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 VSIG10LQ86VR7 867 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 HOMER1Q86YM7 354 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 SUGCTQ9HAC7 445 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 INSL6Q9Y581 213 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 KIAA1217Q5T5P2 1943 aa18.43■□□□□ 0.54
CSGALNACT1-213ENST00000523262 C17orf102A2RUQ5 167 aa18.42■□□□□ 0.54
CSGALNACT1-213ENST00000523262 RSPH10B2B2RC85 870 aa18.42■□□□□ 0.54
CSGALNACT1-213ENST00000523262 RGS20O76081 388 aa18.42■□□□□ 0.54
CSGALNACT1-213ENST00000523262 RSPH10BP0C881 870 aa18.42■□□□□ 0.54
CSGALNACT1-213ENST00000523262 PLA2G5P39877 138 aa18.42■□□□□ 0.54
CSGALNACT1-213ENST00000523262 THPOP40225 353 aa18.42■□□□□ 0.54
CSGALNACT1-213ENST00000523262 TCTN1Q2MV58 587 aa18.42■□□□□ 0.54
CSGALNACT1-213ENST00000523262 MAD2L2Q9UI95 211 aa18.42■□□□□ 0.54
CSGALNACT1-213ENST00000523262 LAMA4Q16363 1823 aa18.42■□□□□ 0.54
CSGALNACT1-213ENST00000523262 ERICH2A1L162 156 aa18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 PPP1R11O60927 126 aaPredicted RBP18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 UBA1P22314 1058 aaKnown RBP18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 TRAF7Q6Q0C0 670 aa18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 SERINC5Q86VE9 423 aa18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 FCHSD1Q86WN1 690 aa18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 MYOCDQ8IZQ8 938 aa18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 ATP6V0A1Q93050 837 aa18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 WNT8BQ93098 351 aa18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 MTMR8Q96EF0 704 aa18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 MYH6P13533 1939 aa18.41■□□□□ 0.54
CSGALNACT1-213ENST00000523262 REV3LO60673 3130 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 PALM3A6NDB9 673 aaPredicted RBP18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 H3BRB1 525 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 NOP56O00567 594 aaKnown RBP18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 IGHDP01880 384 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 SP2Q02086 613 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 MBTPS1Q14703 1052 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 SEC23AQ15436 765 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 GNPTABQ3T906 1256 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 TMEM31Q5JXX7 168 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 FBXO22Q8NEZ5 403 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 DBF4BQ8NFT6 615 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 C16orf70Q9BSU1 422 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 EPHX3Q9H6B9 360 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 TUT1Q9H6E5 874 aaKnown RBP18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 HCN4Q9Y3Q4 1203 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 XIRP2A4UGR9 3374 aa18.4■□□□□ 0.54
CSGALNACT1-213ENST00000523262 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.39■□□□□ 0.53
CSGALNACT1-213ENST00000523262 CYB5R4Q7L1T6 521 aa18.39■□□□□ 0.53
CSGALNACT1-213ENST00000523262 IL31RAQ8NI17 732 aa18.39■□□□□ 0.53
CSGALNACT1-213ENST00000523262 ZFP91Q96JP5 570 aaPredicted RBP18.39■□□□□ 0.53
CSGALNACT1-213ENST00000523262 PIGSQ96S52 555 aa18.39■□□□□ 0.53
CSGALNACT1-213ENST00000523262 UBE2ZQ9H832 354 aaPredicted RBP18.39■□□□□ 0.53
CSGALNACT1-213ENST00000523262 IFIT3O14879 490 aaKnown RBP18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 GNAT1P11488 350 aa18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 HIC1Q14526 733 aa18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 GRM4Q14833 912 aa18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 SART3Q15020 963 aaKnown RBP18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 SEPT8Q92599 483 aa18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 LRFN3Q9BTN0 628 aa18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 USP26Q9BXU7 913 aa18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 RIOX1Q9H6W3 641 aa18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 COL4A4P53420 1690 aaPredicted RBP18.38■□□□□ 0.53
CSGALNACT1-213ENST00000523262 PTPRSQ13332 1948 aa18.37■□□□□ 0.53
CSGALNACT1-213ENST00000523262 PNMA6FA0A0J9YX94 578 aa18.37■□□□□ 0.53
CSGALNACT1-213ENST00000523262 CAND2O75155 1236 aa18.37■□□□□ 0.53
CSGALNACT1-213ENST00000523262 STAM2O75886 525 aa18.37■□□□□ 0.53
CSGALNACT1-213ENST00000523262 LGALS2P05162 132 aa18.37■□□□□ 0.53
CSGALNACT1-213ENST00000523262 SMIM10L2AP0DMW4 78 aa18.37■□□□□ 0.53
CSGALNACT1-213ENST00000523262 SMIM10L2BP0DMW5 78 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms