RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 OTOP2Q7RTS6 562 aa21.53■■□□□ 1.04
SPIDR-220ENST00000522900 HERVK_113Q902F9 699 aa21.53■■□□□ 1.04
SPIDR-220ENST00000522900 INPP4AQ96PE3 977 aaPredicted RBP21.53■■□□□ 1.04
SPIDR-220ENST00000522900 ALG1Q9BT22 464 aa21.53■■□□□ 1.04
SPIDR-220ENST00000522900 FAM217BQ9NTX9 383 aaPredicted RBP21.53■■□□□ 1.04
SPIDR-220ENST00000522900 SNX14Q9Y5W7 946 aa21.53■■□□□ 1.04
SPIDR-220ENST00000522900 KLF18A0A0U1RQI7 1052 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 SPATA31C2B4DYI2 1134 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 RBAK-RBAKDNI3L0D1 243 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 ZBTB43O43298 467 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 NEFLP07196 543 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 HOXD8P13378 290 aaPredicted RBP21.52■■□□□ 1.04
SPIDR-220ENST00000522900 PTGISQ16647 500 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 UBE2SQ16763 222 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 RTN1Q16799 776 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 SESTD1Q86VW0 696 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 JAKMIP1Q96N16 626 aaKnown RBP21.52■■□□□ 1.04
SPIDR-220ENST00000522900 MLXIPQ9HAP2 919 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 HDAC6Q9UBN7 1215 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 TELO2Q9Y4R8 837 aa21.52■■□□□ 1.04
SPIDR-220ENST00000522900 COL6A3P12111 3177 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 HAS3O00219 553 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 PPFIA4O75335 1185 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 F2P00734 622 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 CDC27P30260 824 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 ICAM3P32942 547 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 PBX2P40425 430 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 MFSD10Q14728 455 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 PCNX4Q63HM2 1172 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 HEATR3Q7Z4Q2 680 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 DEFB128Q7Z7B8 93 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 CDX2Q99626 313 aaPredicted RBP21.51■■□□□ 1.03
SPIDR-220ENST00000522900 RBM28Q9NW13 759 aaKnown RBP21.51■■□□□ 1.03
SPIDR-220ENST00000522900 V9GY48 417 aaPredicted RBP21.51■■□□□ 1.03
SPIDR-220ENST00000522900 CNTNAP5Q8WYK1 1306 aa21.51■■□□□ 1.03
SPIDR-220ENST00000522900 GOLGA8AA7E2F4 631 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 GOLGA8BA8MQT2 603 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 STAM2O75886 525 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 HMGB1P09429 215 aaKnown RBP21.5■■□□□ 1.03
SPIDR-220ENST00000522900 IQCF3P0C7M6 154 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 DNAJB2P25686 324 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 HIC1Q14526 733 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 KIAA0753Q2KHM9 967 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 WWC2Q6AWC2 1192 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 TYW1BQ6NUM6 668 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 Q6ZUG5 572 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 RPUSD2Q8IZ73 545 aaKnown RBP21.5■■□□□ 1.03
SPIDR-220ENST00000522900 DHX38Q92620 1227 aaKnown RBP21.5■■□□□ 1.03
SPIDR-220ENST00000522900 C16orf70Q9BSU1 422 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 NOD1Q9Y239 953 aa21.5■■□□□ 1.03
SPIDR-220ENST00000522900 ADD1P35611 737 aaKnown RBP21.49■■□□□ 1.03
SPIDR-220ENST00000522900 ZNF200P98182 395 aaPredicted RBP21.49■■□□□ 1.03
SPIDR-220ENST00000522900 APOBRQ0VD83 1088 aa21.49■■□□□ 1.03
SPIDR-220ENST00000522900 GNPTABQ3T906 1256 aa21.49■■□□□ 1.03
SPIDR-220ENST00000522900 CYFIP1Q7L576 1253 aa21.49■■□□□ 1.03
SPIDR-220ENST00000522900 C7orf31Q8N865 590 aa21.49■■□□□ 1.03
SPIDR-220ENST00000522900 RETREG2Q8NC44 543 aa21.49■■□□□ 1.03
SPIDR-220ENST00000522900 PBX4Q9BYU1 374 aa21.49■■□□□ 1.03
SPIDR-220ENST00000522900 GTF2IRD1Q9UHL9 959 aa21.49■■□□□ 1.03
SPIDR-220ENST00000522900 NAP1L2Q9ULW6 460 aaPredicted RBP21.49■■□□□ 1.03
SPIDR-220ENST00000522900 FIBPO43427 364 aa21.48■■□□□ 1.03
SPIDR-220ENST00000522900 FGD1P98174 961 aa21.48■■□□□ 1.03
SPIDR-220ENST00000522900 XRRA1Q6P2D8 792 aa21.48■■□□□ 1.03
SPIDR-220ENST00000522900 BRF1Q92994 677 aa21.48■■□□□ 1.03
SPIDR-220ENST00000522900 KATNAL1Q9BW62 490 aa21.48■■□□□ 1.03
SPIDR-220ENST00000522900 PCDHA6Q9UN73 950 aa21.48■■□□□ 1.03
SPIDR-220ENST00000522900 PCDHA8Q9Y5H6 950 aa21.48■■□□□ 1.03
SPIDR-220ENST00000522900 PITPNM1O00562 1244 aa21.47■■□□□ 1.03
SPIDR-220ENST00000522900 ITGB5P18084 799 aa21.47■■□□□ 1.03
SPIDR-220ENST00000522900 BFSP2Q13515 415 aa21.47■■□□□ 1.03
SPIDR-220ENST00000522900 NEDD9Q14511 834 aa21.47■■□□□ 1.03
SPIDR-220ENST00000522900 GPNMBQ14956 572 aa21.47■■□□□ 1.03
SPIDR-220ENST00000522900 BLOC1S2Q6QNY1 142 aa21.47■■□□□ 1.03
SPIDR-220ENST00000522900 MYLIPQ8WY64 445 aa21.47■■□□□ 1.03
SPIDR-220ENST00000522900 STXBP3O00186 592 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 ATP9AO75110 1047 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 REC8O95072 547 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 NAPAP54920 295 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 GRIN2CQ14957 1233 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 METTL7BQ6UX53 244 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 SLC17A8Q8NDX2 589 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 WNT8BQ93098 351 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 TIFAQ96CG3 184 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 GPR20Q99678 358 aa21.46■■□□□ 1.03
SPIDR-220ENST00000522900 H3BRB1 525 aa21.45■■□□□ 1.02
SPIDR-220ENST00000522900 LGALS2P05162 132 aa21.45■■□□□ 1.02
SPIDR-220ENST00000522900 RPS6KB1P23443 525 aa21.45■■□□□ 1.02
SPIDR-220ENST00000522900 SP4Q02446 784 aa21.45■■□□□ 1.02
SPIDR-220ENST00000522900 NLRX1Q86UT6 975 aa21.45■■□□□ 1.02
SPIDR-220ENST00000522900 PGBD1Q96JS3 809 aa21.45■■□□□ 1.02
SPIDR-220ENST00000522900 MTIF3Q9H2K0 278 aaKnown RBP21.45■■□□□ 1.02
SPIDR-220ENST00000522900 ZNF576Q9H609 170 aa21.45■■□□□ 1.02
SPIDR-220ENST00000522900 TUT1Q9H6E5 874 aaKnown RBP21.45■■□□□ 1.02
SPIDR-220ENST00000522900 UBIAD1Q9Y5Z9 338 aa21.45■■□□□ 1.02
SPIDR-220ENST00000522900 SLC4A7Q9Y6M7 1214 aa21.45■■□□□ 1.02
SPIDR-220ENST00000522900 TMEM265A0A087WTH1 108 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 SPDYE3A6NKU9 549 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 ZBBXA8MT70 800 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 NOP56O00567 594 aaKnown RBP21.44■■□□□ 1.02
SPIDR-220ENST00000522900 CKBP12277 381 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms