RNA–Protein interactions for RNA: ENST00000522502.1

CLU-213, Transcript of clusterin, human

TSL 2

Gene CLU, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLU-213	ENST00000522502	GRM4	Q14833	912 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	PWP2	Q15269	919 aa	Known RBP	11.75	□□□□□ -0.53
CLU-213	ENST00000522502	SKIV2L	Q15477	1246 aa	Known RBP	11.75	□□□□□ -0.53
CLU-213	ENST00000522502	MYSM1	Q5VVJ2	828 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	LRRC8D	Q7L1W4	858 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	TRIM50	Q86XT4	487 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
CLU-213	ENST00000522502	AMN	Q9BXJ7	453 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	KRT23	Q9C075	422 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	MTIF3	Q9H2K0	278 aa	Known RBP	11.75	□□□□□ -0.53
CLU-213	ENST00000522502	MICAL3	Q7RTP6	2002 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502		E7EWF7	191 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	PITPNM1	O00562	1244 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	IFIT3	O14879	490 aa	Known RBP	11.74	□□□□□ -0.53
CLU-213	ENST00000522502	ZBTB5	O15062	677 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	EIF3J	O75822	258 aa	Known RBP	11.74	□□□□□ -0.53
CLU-213	ENST00000522502	SELP	P16109	830 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	MRPS5	P82675	430 aa	Known RBP	11.74	□□□□□ -0.53
CLU-213	ENST00000522502	BFSP2	Q13515	415 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	DGKD	Q16760	1214 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	BRDT	Q58F21	947 aa	Predicted RBP	11.74	□□□□□ -0.53
CLU-213	ENST00000522502	CELF3	Q5SZQ8	465 aa	Known RBP	11.74	□□□□□ -0.53
CLU-213	ENST00000522502	DHX37	Q8IY37	1157 aa	Known RBP	11.74	□□□□□ -0.53
CLU-213	ENST00000522502	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.74	□□□□□ -0.53
CLU-213	ENST00000522502	ZBTB10	Q96DT7	871 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	SPATA33	Q96N06	139 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	IWS1	Q96ST2	819 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	UHRF1	Q96T88	793 aa	Predicted RBP	11.74	□□□□□ -0.53
CLU-213	ENST00000522502	C16orf70	Q9BSU1	422 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	RAD50	Q92878	1312 aa		11.74	□□□□□ -0.53
CLU-213	ENST00000522502	TREH	O43280	583 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	TLL1	O43897	1013 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	KPNA6	O60684	536 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	PLEKHA8P1	O95397	391 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	F2	P00734	622 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	SI	P14410	1827 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	CAST	P20810	708 aa	Known RBP	11.73	□□□□□ -0.53
CLU-213	ENST00000522502	COL9A1	P20849	921 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	SP4	Q02446	784 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	PTPN11	Q06124	597 aa	Predicted RBP	11.73	□□□□□ -0.53
CLU-213	ENST00000522502	TROAP	Q12815	778 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	ATG2A	Q2TAZ0	1938 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	USP17L6P	Q6QN14	398 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	VSIG10L	Q86VR7	867 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	SESTD1	Q86VW0	696 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	MCF2L2	Q86YR7	1114 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	C7orf31	Q8N865	590 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	SLC9A7	Q96T83	725 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	SEZ6L	Q9BYH1	1024 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	LRRC2	Q9BYS8	371 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	RIOX1	Q9H6W3	641 aa		11.73	□□□□□ -0.53
CLU-213	ENST00000522502	LGR5	O75473	907 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	CXCL10	P02778	98 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	PFKM	P08237	780 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	CTSH	P09668	335 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	ACTN1	P12814	892 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	RFC2	P35250	354 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	LAMC2	Q13753	1193 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	CCDC178	Q5BJE1	867 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	CYFIP1	Q7L576	1253 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	TICAM2	Q86XR7	235 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.72	□□□□□ -0.53
CLU-213	ENST00000522502	PPTC7	Q8NI37	304 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	IGDCC4	Q8TDY8	1250 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	AFAP1L1	Q8TED9	768 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	SYMPK	Q92797	1274 aa	Known RBP	11.72	□□□□□ -0.53
CLU-213	ENST00000522502	MPHOSPH6	Q99547	160 aa	Known RBP	11.72	□□□□□ -0.53
CLU-213	ENST00000522502	C17orf80	Q9BSJ5	609 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	EPHX3	Q9H6B9	360 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	CD320	Q9NPF0	282 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	CTNNA3	Q9UI47	895 aa		11.72	□□□□□ -0.53
CLU-213	ENST00000522502	LOXHD1	Q8IVV2	1947 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	LINC01553	A4QN01	128 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.71	□□□□□ -0.53
CLU-213	ENST00000522502	HIP1	O00291	1037 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	LGALS2	P05162	132 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	POLR2M	P0CAP2	368 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	SMIM10L2A	P0DMW4	78 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	SMIM10L2B	P0DMW5	78 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	HOXD8	P13378	290 aa	Predicted RBP	11.71	□□□□□ -0.53
CLU-213	ENST00000522502	THPO	P40225	353 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	GHRHR	Q02643	423 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	UTP14C	Q5TAP6	766 aa	Known RBP	11.71	□□□□□ -0.53
CLU-213	ENST00000522502	DBF4B	Q8NFT6	615 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	CAGE1	Q8TC20	777 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	EMID1	Q96A84	441 aa	Predicted RBP	11.71	□□□□□ -0.53
CLU-213	ENST00000522502	RNPEP	Q9H4A4	650 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	CNNM2	Q9H8M5	875 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	SUGCT	Q9HAC7	445 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	LY9	Q9HBG7	655 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	SETD4	Q9NVD3	440 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	PKD2L1	Q9P0L9	805 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	PNMA2	Q9UL42	364 aa		11.71	□□□□□ -0.53
CLU-213	ENST00000522502	RBM8A	Q9Y5S9	174 aa	Known RBP	11.71	□□□□□ -0.53
CLU-213	ENST00000522502	KAT6A	Q92794	2004 aa		11.7	□□□□□ -0.54
CLU-213	ENST00000522502		B4DLN1	442 aa		11.7	□□□□□ -0.54
CLU-213	ENST00000522502	SGSM2	O43147	1006 aa		11.7	□□□□□ -0.54
CLU-213	ENST00000522502	ATP9A	O75110	1047 aa		11.7	□□□□□ -0.54
CLU-213	ENST00000522502	KCNJ6	P48051	423 aa		11.7	□□□□□ -0.54
CLU-213	ENST00000522502	MRPL12	P52815	198 aa	Known RBP	11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms