RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
MRPS28-206ENST00000520946 TICAM2Q86XR7 235 aa13.39□□□□□ -0.27
MRPS28-206ENST00000520946 FAM178BQ8IXR5 827 aa13.39□□□□□ -0.27
MRPS28-206ENST00000520946 DBF4BQ8NFT6 615 aa13.39□□□□□ -0.27
MRPS28-206ENST00000520946 ATP6V0A1Q93050 837 aa13.39□□□□□ -0.27
MRPS28-206ENST00000520946 EMID1Q96A84 441 aaPredicted RBP13.39□□□□□ -0.27
MRPS28-206ENST00000520946 MRPL38Q96DV4 380 aaKnown RBP13.39□□□□□ -0.27
MRPS28-206ENST00000520946 C17orf80Q9BSJ5 609 aa13.39□□□□□ -0.27
MRPS28-206ENST00000520946 UBAC1Q9BSL1 405 aa13.39□□□□□ -0.27
MRPS28-206ENST00000520946 AMNQ9BXJ7 453 aa13.39□□□□□ -0.27
MRPS28-206ENST00000520946 PXMP2Q9NR77 195 aa13.39□□□□□ -0.27
MRPS28-206ENST00000520946 ZMYM6O95789 1325 aa13.39□□□□□ -0.27
MRPS28-206ENST00000520946 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
MRPS28-206ENST00000520946 NOP56O00567 594 aaKnown RBP13.38□□□□□ -0.27
MRPS28-206ENST00000520946 F2P00734 622 aa13.38□□□□□ -0.27
MRPS28-206ENST00000520946 IL9P15248 144 aa13.38□□□□□ -0.27
MRPS28-206ENST00000520946 TRAF1Q13077 416 aa13.38□□□□□ -0.27
MRPS28-206ENST00000520946 GPM6BQ13491 265 aa13.38□□□□□ -0.27
MRPS28-206ENST00000520946 GPNMBQ14956 572 aa13.38□□□□□ -0.27
MRPS28-206ENST00000520946 ZNF589Q86UQ0 364 aaPredicted RBP13.38□□□□□ -0.27
MRPS28-206ENST00000520946 ALYREFQ86V81 257 aaKnown RBP13.38□□□□□ -0.27
MRPS28-206ENST00000520946 TBC1D10CQ8IV04 446 aa13.38□□□□□ -0.27
MRPS28-206ENST00000520946 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.38□□□□□ -0.27
MRPS28-206ENST00000520946 KHSRPQ92945 711 aaKnown RBP eCLIP13.38□□□□□ -0.274e-8■■■□□ 15.6
MRPS28-206ENST00000520946 CTAGE1Q96RT6 745 aa13.38□□□□□ -0.27
MRPS28-206ENST00000520946 ZSCAN10Q96SZ4 725 aaPredicted RBP13.38□□□□□ -0.27
MRPS28-206ENST00000520946 COL20A1Q9P218 1284 aa13.38□□□□□ -0.27
MRPS28-206ENST00000520946 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
MRPS28-206ENST00000520946 GGPS1O95749 300 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 GNAT1P11488 350 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 EPC2Q52LR7 807 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 CELF3Q5SZQ8 465 aaKnown RBP13.37□□□□□ -0.27
MRPS28-206ENST00000520946 BANK1Q8NDB2 785 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 UPF3BQ9BZI7 483 aaKnown RBP13.37□□□□□ -0.27
MRPS28-206ENST00000520946 KRT23Q9C075 422 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 CD320Q9NPF0 282 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 DIAPH3Q9NSV4 1193 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 BDP1A6H8Y1 2624 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 CHD9Q3L8U1 2897 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 NEDD4P46934 1319 aa13.37□□□□□ -0.27
MRPS28-206ENST00000520946 GRXCR2A6NFK2 248 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 B4E1Z4 1266 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 HAS3O00219 553 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 CCND2P30279 289 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 IMMTQ16891 758 aaKnown RBP13.36□□□□□ -0.27
MRPS28-206ENST00000520946 TCTN1Q2MV58 587 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 IFIT1BQ5T764 474 aaKnown RBP13.36□□□□□ -0.27
MRPS28-206ENST00000520946 MYSM1Q5VVJ2 828 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 FCHSD1Q86WN1 690 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 IFIH1Q9BYX4 1025 aaKnown RBP13.36□□□□□ -0.27
MRPS28-206ENST00000520946 JMJD4Q9H9V9 463 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 C11orf16Q9NQ32 467 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 MAP3K20Q9NYL2 800 aaKnown RBP13.36□□□□□ -0.27
MRPS28-206ENST00000520946 PCDHA1Q9Y5I3 950 aa13.36□□□□□ -0.27
MRPS28-206ENST00000520946 COL4A4P53420 1690 aaPredicted RBP13.35□□□□□ -0.27
MRPS28-206ENST00000520946 H3BRB1 525 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 GCOM1H8Y6P7 765 aaPredicted RBP13.35□□□□□ -0.27
MRPS28-206ENST00000520946 DCXO43602 365 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 NCK2O43639 380 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 CTSHP09668 335 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 POLR2MP0CAP2 368 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 TGFB3P10600 412 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 SDSP20132 328 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
MRPS28-206ENST00000520946 GNPTABQ3T906 1256 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 CWC27Q6UX04 472 aaKnown RBP13.35□□□□□ -0.27
MRPS28-206ENST00000520946 SERINC5Q86VE9 423 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 TMEM192Q8IY95 271 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 SAMD3Q8N6K7 520 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 PDCD2LQ9BRP1 358 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 NSUN3Q9H649 340 aaKnown RBP13.35□□□□□ -0.27
MRPS28-206ENST00000520946 TUT1Q9H6E5 874 aaKnown RBP13.35□□□□□ -0.27
MRPS28-206ENST00000520946 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 CLDND1Q9NY35 253 aa13.35□□□□□ -0.27
MRPS28-206ENST00000520946 KLRF2D3W0D1 207 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 H3BNC9 293 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 HIP1O00291 1037 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 ZBTB5O15062 677 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 SMIM10L2AP0DMW4 78 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 SMIM10L2BP0DMW5 78 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 HSD17B4P51659 736 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 HTRA4P83105 476 aaPredicted RBP13.34□□□□□ -0.27
MRPS28-206ENST00000520946 MBTPS1Q14703 1052 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 TRIM71Q2Q1W2 868 aaKnown RBP13.34□□□□□ -0.27
MRPS28-206ENST00000520946 HSDL1Q3SXM5 330 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 PLEKHG4Q58EX7 1191 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 TCEAL5Q5H9L2 206 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 HOMER1Q86YM7 354 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 FIBCD1Q8N539 461 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 APBB2Q92870 758 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 WNT8BQ93098 351 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 PABPC5Q96DU9 382 aaKnown RBP13.34□□□□□ -0.27
MRPS28-206ENST00000520946 IL17RAQ96F46 866 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 LNPKQ9C0E8 428 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 ZSWIM5Q9P217 1185 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 ZNF215Q9UL58 517 aaPredicted RBP13.34□□□□□ -0.27
MRPS28-206ENST00000520946 SALL3Q9BXA9 1300 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 MUC3AQ02505 3323 aa13.34□□□□□ -0.27
MRPS28-206ENST00000520946 ERICH2A1L162 156 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms