RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 ADAM15Q13444 863 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 SMAD4Q13485 552 aaKnown RBP9.46□□□□□ -0.9
CSMD1-209ENST00000520630 PPP2R5BQ15173 497 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 PWP2Q15269 919 aaKnown RBP9.46□□□□□ -0.9
CSMD1-209ENST00000520630 PTPROQ16827 1216 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 PLEKHG4Q58EX7 1191 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 RCSD1Q6JBY9 416 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 AMOTL1Q8IY63 956 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 MYOCDQ8IZQ8 938 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 OSBP2Q969R2 916 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 PRRX2Q99811 253 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 RC3H2Q9HBD1 1191 aaKnown RBP9.46□□□□□ -0.9
CSMD1-209ENST00000520630 INCENPQ9NQS7 918 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 TLR9Q9NR96 1032 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 CLEC1BQ9P126 229 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 CCPG1Q9ULG6 757 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 NOD1Q9Y239 953 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 NCOR2Q9Y618 2525 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 CACNA1IQ9P0X4 2223 aa9.46□□□□□ -0.9
CSMD1-209ENST00000520630 LAMA4Q16363 1823 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 C5orf67F2Z3F1 127 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 EFCAB14O75071 495 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 KRT37O76014 449 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 PARNO95453 639 aaKnown RBP9.45□□□□□ -0.9
CSMD1-209ENST00000520630 GLP2RO95838 553 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 TXNP10599 105 aaKnown RBP9.45□□□□□ -0.9
CSMD1-209ENST00000520630 DNAJB1P25685 340 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 SLC16A2P36021 539 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 NOVP48745 357 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 PTK7Q13308 1070 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 LY6KQ17RY6 165 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 GIMAP6Q6P9H5 292 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 ADGRD2Q7Z7M1 963 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 ERC1Q8IUD2 1116 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 CCDC155Q8N6L0 562 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 SCFD2Q8WU76 684 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 TBC1D5Q92609 795 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 ATOH1Q92858 354 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-209ENST00000520630 SAMD11Q96NU1 681 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 DCTPP1Q9H773 170 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 ADD3Q9UEY8 706 aaKnown RBP9.45□□□□□ -0.9
CSMD1-209ENST00000520630 FAM50BQ9Y247 325 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 OTOGLQ3ZCN5 2332 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 SPTBN2O15020 2390 aa9.45□□□□□ -0.9
CSMD1-209ENST00000520630 DOCK6Q96HP0 2047 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 FOXP2O15409 715 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 UPP2O95045 317 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 SLC1A4P43007 532 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 PSEN2P49810 448 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 RPS6P62753 249 aaKnown RBP9.44□□□□□ -0.9
CSMD1-209ENST00000520630 TFAP4Q01664 338 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 SIGLEC14Q08ET2 396 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 BTNL9Q6UXG8 535 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 ERMP1Q7Z2K6 904 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 SKAP1Q86WV1 359 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 ZNF444Q8N0Y2 327 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-209ENST00000520630 POP1Q99575 1024 aaKnown RBP9.44□□□□□ -0.9
CSMD1-209ENST00000520630 ALG1Q9BT22 464 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 FSD1Q9BTV5 496 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 CD207Q9UJ71 328 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 DOCK8Q8NF50 2099 aa9.44□□□□□ -0.9
CSMD1-209ENST00000520630 BAHCC1Q9P281 2608 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 MED19A0JLT2 244 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-209ENST00000520630 PTPDC1A2A3K4 754 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 M0R2C6 588 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 F2P00734 622 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 AMHP03971 560 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 ZNF286BP0CG31 522 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 CALML3P27482 149 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 HOXC8P31273 242 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 NBL1P41271 181 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 PKN1Q16512 942 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 SUGP1Q8IWZ8 645 aaKnown RBP9.43□□□□□ -0.9
CSMD1-209ENST00000520630 CLASRPQ8N2M8 674 aaKnown RBP9.43□□□□□ -0.9
CSMD1-209ENST00000520630 SMRP1Q8NCR6 262 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.43□□□□□ -0.9
CSMD1-209ENST00000520630 IGFLR1Q9H665 355 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 COL20A1Q9P218 1284 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 TRPC6Q9Y210 931 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.43□□□□□ -0.9
CSMD1-209ENST00000520630 CHD6Q8TD26 2715 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 RALGAPA1Q6GYQ0 2036 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 MIA3Q5JRA6 1907 aa9.43□□□□□ -0.9
CSMD1-209ENST00000520630 ACACBO00763 2458 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 CACNA1GO43497 2377 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 RAD50Q92878 1312 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 NCK2O43639 380 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 HMMRO75330 724 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 IFIT2P09913 472 aaKnown RBP9.42□□□□□ -0.9
CSMD1-209ENST00000520630 HOXD8P13378 290 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-209ENST00000520630 BMPR1AP36894 532 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 RBM10P98175 930 aaKnown RBP9.42□□□□□ -0.9
CSMD1-209ENST00000520630 NUCB1Q02818 461 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 PDE4DQ08499 809 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 COASYQ13057 564 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 IKQ13123 557 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-209ENST00000520630 MFSD10Q14728 455 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 KIAA0753Q2KHM9 967 aa9.42□□□□□ -0.9
CSMD1-209ENST00000520630 BRDTQ58F21 947 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-209ENST00000520630 RNF207Q6ZRF8 634 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms