RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 NCAPG2Q86XI2 1143 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 ANKRD13CQ8N6S4 541 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 IGSF22Q8N9C0 903 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 GPRC5AQ8NFJ5 357 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 DNERQ8NFT8 737 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 CYP2W1Q8TAV3 490 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 ANP32BQ92688 251 aaKnown RBP9.64□□□□□ -0.87
VAPB-206ENST00000520497 CCDC34Q96HJ3 373 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 PURBQ96QR8 312 aaKnown RBP9.64□□□□□ -0.87
VAPB-206ENST00000520497 NUP62CLQ9H1M0 184 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 PORCNQ9H237 461 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 MROH8Q9H579 483 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 DACT1Q9NYF0 836 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 KAT6AQ92794 2004 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 DNAJC25-GNG10A0A024R161 153 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 MEIS1O00470 390 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 MSH4O15457 936 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 EIF2AK2P19525 551 aaKnown RBP9.63□□□□□ -0.87
VAPB-206ENST00000520497 DEKP35659 375 aaKnown RBP9.63□□□□□ -0.87
VAPB-206ENST00000520497 MRE11P49959 708 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 SOX10P56693 466 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 CCNA1P78396 465 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 SETQ01105 290 aaPredicted RBP9.63□□□□□ -0.87
VAPB-206ENST00000520497 CNTN2Q02246 1040 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
VAPB-206ENST00000520497 PRR16Q569H4 304 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 SPECC1Q5M775 1068 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 ARHGEF16Q5VV41 709 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 USP49Q70CQ1 688 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 SLFN12Q8IYM2 578 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 ANKRD35Q8N283 1001 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 FAM133AQ8N9E0 248 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 NSUN6Q8TEA1 469 aaKnown RBP9.63□□□□□ -0.87
VAPB-206ENST00000520497 SYMPKQ92797 1274 aaKnown RBP9.63□□□□□ -0.87
VAPB-206ENST00000520497 FGD4Q96M96 766 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 AK8Q96MA6 479 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 FAM20AQ96MK3 541 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 MXRA8Q9BRK3 442 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 EFCC1Q9HA90 598 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 FAM13BQ9NYF5 915 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 UBIAD1Q9Y5Z9 338 aa9.63□□□□□ -0.87
VAPB-206ENST00000520497 A0A087X0B3 334 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 POTEB2H3BUK9 544 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 TLR2O60603 784 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 ZNF202O95125 648 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 NR3C2P08235 984 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 ITGB5P18084 799 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 EDNRBP24530 442 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 CCND2P30279 289 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 SYKP43405 635 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 ALDH5A1P51649 535 aaPredicted RBP9.62□□□□□ -0.87
VAPB-206ENST00000520497 SPIRE1Q08AE8 756 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 PDIA5Q14554 519 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 ZRSR1Q15695 479 aaKnown RBP9.62□□□□□ -0.87
VAPB-206ENST00000520497 LRSAM1Q6UWE0 723 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 VSIG10LQ86VR7 867 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 PLA2G4DQ86XP0 818 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 ABRAQ8N0Z2 381 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 SLC5A5Q92911 643 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 EPSTI1Q96J88 318 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 TIGD1Q96MW7 591 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 INPP4AQ96PE3 977 aaPredicted RBP9.62□□□□□ -0.87
VAPB-206ENST00000520497 IWS1Q96ST2 819 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 CCSER1Q9C0I3 900 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 TNMDQ9H2S6 317 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 TSPY26PQ9H489 355 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 CLSTN2Q9H4D0 955 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 TTC12Q9H892 705 aaPredicted RBP9.62□□□□□ -0.87
VAPB-206ENST00000520497 HOOK1Q9UJC3 728 aaKnown RBP9.62□□□□□ -0.87
VAPB-206ENST00000520497 KCNH3Q9ULD8 1083 aa9.62□□□□□ -0.87
VAPB-206ENST00000520497 LOC102724159A0A0B4J2E5 919 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 SYCE3A1L190 88 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 SOWAHBA6NEL2 793 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 POTEMA6NI47 508 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 STRNO43815 780 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 PSMD10O75832 226 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 STAM2O75886 525 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 RGS20O76081 388 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 FCER1AP12319 257 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 ZNF76P36508 570 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 TECP42680 631 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 TXKP42681 527 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 RGS19P49795 217 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 KCTD2Q14681 263 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 PWP2Q15269 919 aaKnown RBP9.61□□□□□ -0.87
VAPB-206ENST00000520497 E2F4Q16254 413 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 TMEM266Q2M3C6 531 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 C17orf99Q6UX52 265 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 RBM43Q6ZSC3 357 aaKnown RBP9.61□□□□□ -0.87
VAPB-206ENST00000520497 GPR142Q7Z601 462 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 GJA10Q969M2 543 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 GPRASP2Q96D09 838 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 MMP19Q99542 508 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 PYM1Q9BRP8 204 aaKnown RBP9.61□□□□□ -0.87
VAPB-206ENST00000520497 MMTAG2Q9BU76 263 aaKnown RBP9.61□□□□□ -0.87
VAPB-206ENST00000520497 RAB34Q9BZG1 259 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 JADE2Q9NQC1 790 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 KCNH7Q9NS40 1196 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 SAGE1Q9NXZ1 904 aa9.61□□□□□ -0.87
VAPB-206ENST00000520497 ADD3Q9UEY8 706 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms