RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 UNC80Q8N2C7 3258 aa29.23■■■□□ 2.27
VEGFA-220ENST00000519767 KIAA1217Q5T5P2 1943 aa29.22■■■□□ 2.27
VEGFA-220ENST00000519767 PIK3CDO00329 1044 aa29.22■■■□□ 2.27
VEGFA-220ENST00000519767 PARNO95453 639 aaKnown RBP29.22■■■□□ 2.27
VEGFA-220ENST00000519767 SP2Q02086 613 aa29.22■■■□□ 2.27
VEGFA-220ENST00000519767 MFSD10Q14728 455 aa29.22■■■□□ 2.27
VEGFA-220ENST00000519767 XRRA1Q6P2D8 792 aa29.22■■■□□ 2.27
VEGFA-220ENST00000519767 FTOQ9C0B1 505 aaKnown RBP eCLIP29.22■■■□□ 2.275e-19■□□□□ 10.1
VEGFA-220ENST00000519767 HDAC6Q9UBN7 1215 aa29.22■■■□□ 2.27
VEGFA-220ENST00000519767 PCDHA11Q9Y5I1 949 aa29.22■■■□□ 2.27
VEGFA-220ENST00000519767 HAS3O00219 553 aa29.21■■■□□ 2.27
VEGFA-220ENST00000519767 ATP2A2P16615 1042 aaKnown RBP29.21■■■□□ 2.27
VEGFA-220ENST00000519767 KIAA0753Q2KHM9 967 aa29.21■■■□□ 2.27
VEGFA-220ENST00000519767 SMARCC2Q8TAQ2 1214 aa29.21■■■□□ 2.27
VEGFA-220ENST00000519767 GAS2L1Q99501 681 aaPredicted RBP29.21■■■□□ 2.27
VEGFA-220ENST00000519767 ALG1Q9BT22 464 aa29.21■■■□□ 2.27
VEGFA-220ENST00000519767 FRMPD4Q14CM0 1322 aa29.2■■■□□ 2.27
VEGFA-220ENST00000519767 UBA1P22314 1058 aaKnown RBP29.2■■■□□ 2.26
VEGFA-220ENST00000519767 ICAM3P32942 547 aa29.2■■■□□ 2.26
VEGFA-220ENST00000519767 HSDL1Q3SXM5 330 aa29.2■■■□□ 2.26
VEGFA-220ENST00000519767 SRBD1Q8N5C6 995 aaKnown RBP29.2■■■□□ 2.26
VEGFA-220ENST00000519767 FANCBQ8NB91 859 aa29.2■■■□□ 2.26
VEGFA-220ENST00000519767 PHOSPHO2Q8TCD6 241 aa29.2■■■□□ 2.26
VEGFA-220ENST00000519767 INPP4AQ96PE3 977 aaPredicted RBP29.2■■■□□ 2.26
VEGFA-220ENST00000519767 SELPP16109 830 aa29.19■■■□□ 2.26
VEGFA-220ENST00000519767 MRPS9P82933 396 aaKnown RBP29.19■■■□□ 2.26
VEGFA-220ENST00000519767 RBL2Q08999 1139 aa29.19■■■□□ 2.26
VEGFA-220ENST00000519767 NEDD9Q14511 834 aa29.19■■■□□ 2.26
VEGFA-220ENST00000519767 SYNE3Q6ZMZ3 975 aa29.19■■■□□ 2.26
VEGFA-220ENST00000519767 SGMS1Q86VZ5 419 aa29.19■■■□□ 2.26
VEGFA-220ENST00000519767 CTAGE1Q96RT6 745 aa29.19■■■□□ 2.26
VEGFA-220ENST00000519767 NKX2-4Q9H2Z4 354 aa29.19■■■□□ 2.26
VEGFA-220ENST00000519767 SPATA31C2B4DYI2 1134 aa29.18■■■□□ 2.26
VEGFA-220ENST00000519767 ZNF286BP0CG31 522 aa29.18■■■□□ 2.26
VEGFA-220ENST00000519767 PTK7Q13308 1070 aa29.18■■■□□ 2.26
VEGFA-220ENST00000519767 PSTPIP2Q9H939 334 aa29.18■■■□□ 2.26
VEGFA-220ENST00000519767 YBX2Q9Y2T7 364 aaKnown RBP29.18■■■□□ 2.26
VEGFA-220ENST00000519767 PRUNE2Q8WUY3 3088 aa29.18■■■□□ 2.26
VEGFA-220ENST00000519767 MEIS2O14770 477 aa29.17■■■□□ 2.26
VEGFA-220ENST00000519767 BAIAP3O94812 1187 aa29.17■■■□□ 2.26
VEGFA-220ENST00000519767 PLEKHA8P1O95397 391 aa29.17■■■□□ 2.26
VEGFA-220ENST00000519767 PCNX4Q63HM2 1172 aa29.17■■■□□ 2.26
VEGFA-220ENST00000519767 USP17L6PQ6QN14 398 aa29.17■■■□□ 2.26
VEGFA-220ENST00000519767 ZFP91Q96JP5 570 aaPredicted RBP29.17■■■□□ 2.26
VEGFA-220ENST00000519767 NEK1Q96PY6 1258 aa29.17■■■□□ 2.26
VEGFA-220ENST00000519767 SLC9A7Q96T83 725 aa29.17■■■□□ 2.26
VEGFA-220ENST00000519767 CDH23Q9H251 3354 aa29.16■■■□□ 2.26
VEGFA-220ENST00000519767 FIBPO43427 364 aa29.16■■■□□ 2.26
VEGFA-220ENST00000519767 RABGGTBP53611 331 aa29.16■■■□□ 2.26
VEGFA-220ENST00000519767 TSGA10IPQ3SY00 556 aa29.16■■■□□ 2.26
VEGFA-220ENST00000519767 GPKOWQ92917 476 aaPredicted RBP eCLIP29.16■■■□□ 2.269e-7■□□□□ 11
VEGFA-220ENST00000519767 C16orf70Q9BSU1 422 aa29.16■■■□□ 2.26
VEGFA-220ENST00000519767 USP26Q9BXU7 913 aa29.16■■■□□ 2.26
VEGFA-220ENST00000519767 PRDM12Q9H4Q4 367 aa29.16■■■□□ 2.26
VEGFA-220ENST00000519767 RTEL1Q9NZ71 1219 aa29.16■■■□□ 2.26
VEGFA-220ENST00000519767 NOP56O00567 594 aaKnown RBP29.15■■■□□ 2.26
VEGFA-220ENST00000519767 SORBS3O60504 671 aa29.15■■■□□ 2.26
VEGFA-220ENST00000519767 METTL7BQ6UX53 244 aa29.15■■■□□ 2.26
VEGFA-220ENST00000519767 LRRC8DQ7L1W4 858 aa29.15■■■□□ 2.26
VEGFA-220ENST00000519767 DHX38Q92620 1227 aaKnown RBP29.15■■■□□ 2.26
VEGFA-220ENST00000519767 SENP7Q9BQF6 1050 aa29.15■■■□□ 2.26
VEGFA-220ENST00000519767 EYSQ5T1H1 3165 aa29.15■■■□□ 2.26
VEGFA-220ENST00000519767 H3BRB1 525 aa29.14■■■□□ 2.26
VEGFA-220ENST00000519767 CKBP12277 381 aa29.14■■■□□ 2.26
VEGFA-220ENST00000519767 RXRAP19793 462 aa29.14■■■□□ 2.26
VEGFA-220ENST00000519767 COL9A3Q14050 684 aaPredicted RBP29.14■■■□□ 2.26
VEGFA-220ENST00000519767 TMTC3Q6ZXV5 915 aa29.14■■■□□ 2.26
VEGFA-220ENST00000519767 DHX32Q7L7V1 743 aaKnown RBP29.14■■■□□ 2.26
VEGFA-220ENST00000519767 NLRX1Q86UT6 975 aa29.14■■■□□ 2.26
VEGFA-220ENST00000519767 CMTR1Q8N1G2 835 aaKnown RBP29.14■■■□□ 2.26
VEGFA-220ENST00000519767 GIMAP8Q8ND71 665 aaPredicted RBP29.14■■■□□ 2.26
VEGFA-220ENST00000519767 LRRC2Q9BYS8 371 aa29.14■■■□□ 2.26
VEGFA-220ENST00000519767 TUT1Q9H6E5 874 aaKnown RBP29.14■■■□□ 2.26
VEGFA-220ENST00000519767 KIF28PB7ZC32 967 aa29.13■■■□□ 2.25
VEGFA-220ENST00000519767 CDC45O75419 566 aa29.13■■■□□ 2.25
VEGFA-220ENST00000519767 EXOSC10Q01780 885 aaKnown RBP29.13■■■□□ 2.25
VEGFA-220ENST00000519767 KRT32Q14532 448 aa29.13■■■□□ 2.25
VEGFA-220ENST00000519767 PPP2R2DQ66LE6 453 aa29.13■■■□□ 2.25
VEGFA-220ENST00000519767 MYO9BQ13459 2157 aa29.12■■■□□ 2.25
VEGFA-220ENST00000519767 CYFIP1Q7L576 1253 aa29.12■■■□□ 2.25
VEGFA-220ENST00000519767 TEX2Q8IWB9 1127 aa29.12■■■□□ 2.25
VEGFA-220ENST00000519767 CCDC82Q8N4S0 544 aa29.12■■■□□ 2.25
VEGFA-220ENST00000519767 CDHR1Q96JP9 859 aa29.12■■■□□ 2.25
VEGFA-220ENST00000519767 RBM28Q9NW13 759 aaKnown RBP29.12■■■□□ 2.25
VEGFA-220ENST00000519767 CHD7Q9P2D1 2997 aa29.11■■■□□ 2.25
VEGFA-220ENST00000519767 CXCL10P02778 98 aa29.11■■■□□ 2.25
VEGFA-220ENST00000519767 KCNJ6P48051 423 aa29.11■■■□□ 2.25
VEGFA-220ENST00000519767 GPNMBQ14956 572 aa29.11■■■□□ 2.25
VEGFA-220ENST00000519767 SKAP1Q86WV1 359 aa29.11■■■□□ 2.25
VEGFA-220ENST00000519767 BCAS3Q9H6U6 928 aa29.11■■■□□ 2.25
VEGFA-220ENST00000519767 C17orf102A2RUQ5 167 aa29.1■■■□□ 2.25
VEGFA-220ENST00000519767 LGALS2P05162 132 aa29.1■■■□□ 2.25
VEGFA-220ENST00000519767 HMGB1P09429 215 aaKnown RBP29.1■■■□□ 2.25
VEGFA-220ENST00000519767 MYOGP15173 224 aa29.1■■■□□ 2.25
VEGFA-220ENST00000519767 SEMA3FQ13275 785 aa29.1■■■□□ 2.25
VEGFA-220ENST00000519767 TRIM71Q2Q1W2 868 aaKnown RBP29.1■■■□□ 2.25
VEGFA-220ENST00000519767 CNKSR3Q6P9H4 555 aa29.1■■■□□ 2.25
VEGFA-220ENST00000519767 SERINC5Q86VE9 423 aa29.1■■■□□ 2.25
VEGFA-220ENST00000519767 MICU3Q86XE3 530 aa29.1■■■□□ 2.25
VEGFA-220ENST00000519767 HERC6Q8IVU3 1022 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms