RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 LRRC55Q6ZSA7 311 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 CCDC65Q8IXS2 484 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 CERKQ8TCT0 537 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 AENQ8WTP8 325 aaKnown RBP12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 RBM17Q96I25 401 aaKnown RBP12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 RUFY1Q96T51 708 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 GLT8D2Q9H1C3 349 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 RASSF4Q9H2L5 321 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 RRP15Q9Y3B9 282 aaKnown RBP12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 FOCADQ5VW36 1801 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 GAKO14976 1311 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 GOLGA6CA6NDK9 693 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 EPHB6O15197 1021 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 SERPING1P05155 500 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 GOLGA6DP0CG33 693 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 EPHB4P54760 987 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 EHHADHQ08426 723 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 FAM26FQ5R3K3 315 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 EMBQ6PCB8 327 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 BAP1Q92560 729 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 LRRC1Q9BTT6 524 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 GOLGA6AQ9NYA3 693 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 SLC26A4O43511 780 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 SNHG28P0DPA3 235 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 EPS15P42566 896 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 RASSF7Q02833 373 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 COASYQ13057 564 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 GPATCH4Q5T3I0 446 aaKnown RBP12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 C8orf74Q6P047 294 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 LRRC47Q8N1G4 583 aaKnown RBP12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 STIM2Q9P246 746 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 FEZ2Q9UHY8 353 aaPredicted RBP12.53□□□□□ -0.4
NUDCD1-203ENST00000519607 MYH7BA7E2Y1 1941 aa12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 GOLGA8KD6RF30 607 aa12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 RBAK-RBAKDNI3L0D1 243 aa12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 NKRFO15226 690 aaKnown RBP eCLIP12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 BBOX1O75936 387 aa12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 SSBP05455 408 aaKnown RBP eCLIP12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 MATR3P43243 847 aaKnown RBP eCLIP12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 GFPT1Q06210 699 aaPredicted RBP12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 PPFIA1Q13136 1202 aa12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 LRRC41Q15345 812 aa12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 VPS72Q15906 364 aa12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 NFRKBQ6P4R8 1299 aa12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
NUDCD1-203ENST00000519607 A6NNZ2 444 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 MYBL2P10244 700 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 ZNF543Q08ER8 600 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 PICALMQ13492 652 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 ASTE1Q2TB18 679 aaPredicted RBP12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 TUBB8Q3ZCM7 444 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 GBP6Q6ZN66 633 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 IFT20Q8IY31 132 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 ADGRF4Q8IZF3 695 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 NUDT12Q9BQG2 462 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 PSTPIP2Q9H939 334 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 JMJD4Q9H9V9 463 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 NLRC4Q9NPP4 1024 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 RSPH14Q9UHP6 348 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 HSF2BPO75031 334 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 TNFRSF8P28908 595 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 FAM83BQ5T0W9 1011 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 DPP8Q6V1X1 898 aaPredicted RBP12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 PTF1AQ7RTS3 328 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 DNAJC19Q96DA6 116 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 NGLY1Q96IV0 654 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 SUGT1Q9Y2Z0 365 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 MYO3BQ8WXR4 1341 aa12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 ZC3H4Q9UPT8 1303 aaKnown RBP12.51□□□□□ -0.41
NUDCD1-203ENST00000519607 C6orf229H3BNL8 230 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 ZBTB5O15062 677 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 BUB1O43683 1085 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 CXCR5P32302 372 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 EIF6P56537 245 aaKnown RBP12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 KCNMA1Q12791 1236 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 ZCWPW2Q504Y3 356 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 HYIQ5T013 277 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 PRR5LQ6MZQ0 368 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 KCNK18Q7Z418 384 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 C10orf67Q8IYJ2 551 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 FAM107BQ9H098 131 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 PODXL2Q9NZ53 605 aa12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 DMGDHQ9UI17 866 aaKnown RBP12.5□□□□□ -0.41
NUDCD1-203ENST00000519607 SERPINB13Q9UIV8 391 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms