RNA–Protein interactions for RNA: ENST00000518093.1

SH2D4A-203, Transcript of SH2 domain containing 4A, humanhuman

TSL 4

Gene SH2D4A, Length 569 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-203ENST00000518093 RTEL1Q9NZ71 1219 aa5.39□□□□□ -1.55
SH2D4A-203ENST00000518093 TCRBV5S2A0A599 114 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 CCDC85CA6NKD9 419 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 PRRG2O14669 202 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 DGKIO75912 1065 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 FGFR1P11362 822 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 SARSP49591 514 aaKnown RBP5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 CR1LQ2VPA4 569 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 SPATA9Q9BWV2 254 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 EPB41L1Q9H4G0 881 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 ZNF652Q9Y2D9 606 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 MSRB2Q9Y3D2 182 aa5.38□□□□□ -1.55
SH2D4A-203ENST00000518093 TRAV20A0A0B4J274 112 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 U2SURPO15042 1029 aaKnown RBP5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 PDPK1O15530 556 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 PRICKLE3O43900 615 aaPredicted RBP5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 SMARCA5O60264 1052 aaPredicted RBP5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 NOBOXO60393 691 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 GTF2F1P35269 517 aaKnown RBP eCLIP5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 BUD31P41223 144 aaPredicted RBP5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 CHRNA2Q15822 529 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 TTLL7Q6ZT98 887 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 FRMD5Q7Z6J6 570 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 ZC3H18Q86VM9 953 aaKnown RBP5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 LRRC47Q8N1G4 583 aaKnown RBP5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 KYQ8NBH2 561 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 PIP4K2CQ8TBX8 421 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 DCAF4Q8WV16 495 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 YIPF4Q9BSR8 244 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 USP40Q9NVE5 1235 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 NTMQ9P121 344 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 PFDN2Q9UHV9 154 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 PCDHB4Q9Y5E5 795 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 NCANO14594 1321 aa5.37□□□□□ -1.55
SH2D4A-203ENST00000518093 COL6A2P12110 1019 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 THBS2P35442 1172 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 ITGA1P56199 1179 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 NKX3-2P78367 333 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 IFRD2Q12894 506 aaPredicted RBP5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 EMC4Q5J8M3 183 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 RSPO2Q6UXX9 243 aaPredicted RBP5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 LBX2Q6XYB7 198 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 RBM12BQ8IXT5 1001 aaKnown RBP5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 DDX1Q92499 740 aaKnown RBP5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 TOE1Q96GM8 510 aaKnown RBP5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 KCNJ15Q99712 375 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 PCDH18Q9HCL0 1135 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 MYOTQ9UBF9 498 aa5.36□□□□□ -1.55
SH2D4A-203ENST00000518093 ASXL2Q76L83 1435 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 SLC27A2O14975 620 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 ADCY3O60266 1144 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 DIAPH1O60610 1272 aaKnown RBP5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 LRG1P02750 347 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 SYN1P17600 705 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 RTP5Q14D33 572 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 MTERF2Q49AM1 385 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 FOXB2Q5VYV0 432 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 FERMT3Q86UX7 667 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 ZNF761Q86XN6 746 aaPredicted RBP5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 TTLL6Q8N841 843 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 CXorf38Q8TB03 319 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 ADAMTS17Q8TE56 1095 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 ZNF669Q96BR6 464 aaPredicted RBP5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 TEPSINQ96N21 525 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 C8orf37Q96NL8 207 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 CCDC113Q9H0I3 377 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 SMOC1Q9H4F8 434 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 SLC6A20Q9NP91 592 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 DTLQ9NZJ0 730 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 WASF3Q9UPY6 502 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 DUSP10Q9Y6W6 482 aa5.35□□□□□ -1.55
SH2D4A-203ENST00000518093 DDX3XO00571 662 aaKnown RBP eCLIP5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 GRK2P25098 689 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 RPL13P26373 211 aaKnown RBP5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 GRK3P35626 688 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 GPR85P60893 370 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 GRIN1Q05586 938 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 SSRP1Q08945 709 aaKnown RBP5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 ADAM9Q13443 819 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 RASGRF1Q13972 1273 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 FAM209AQ5JX71 171 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 STYK1Q6J9G0 422 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 TEPPQ6URK8 271 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 IFNL3Q8IZI9 196 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 CLEC4DQ8WXI8 215 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 NGRNQ9NPE2 291 aaKnown RBP5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 RBPJLQ9UBG7 517 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 ASH2LQ9UBL3 628 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 TRAF6Q9Y4K3 522 aa5.34□□□□□ -1.55
SH2D4A-203ENST00000518093 KRIT1O00522 736 aa5.33□□□□□ -1.56
SH2D4A-203ENST00000518093 NKRFO15226 690 aaKnown RBP eCLIP5.33□□□□□ -1.56
SH2D4A-203ENST00000518093 FAM153BP0C7A2 387 aa5.33□□□□□ -1.56
SH2D4A-203ENST00000518093 GJA9P57773 515 aa5.33□□□□□ -1.56
SH2D4A-203ENST00000518093 KIZQ2M2Z5 673 aa5.33□□□□□ -1.56
SH2D4A-203ENST00000518093 SKOR2Q2VWA4 1001 aaPredicted RBP5.33□□□□□ -1.56
SH2D4A-203ENST00000518093 PRR31Q5SQ13 230 aa5.33□□□□□ -1.56
SH2D4A-203ENST00000518093 NBPF6Q5VWK0 638 aa5.33□□□□□ -1.56
SH2D4A-203ENST00000518093 MCTP2Q6DN12 878 aa5.33□□□□□ -1.56
SH2D4A-203ENST00000518093 OTOP3Q7RTS5 596 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms