RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
SPIDR-205ENST00000518060 CELF3Q5SZQ8 465 aaKnown RBP12.17□□□□□ -0.46
SPIDR-205ENST00000518060 SGMS1Q86VZ5 419 aa12.17□□□□□ -0.46
SPIDR-205ENST00000518060 EMID1Q96A84 441 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-205ENST00000518060 JAKMIP1Q96N16 626 aaKnown RBP12.17□□□□□ -0.46
SPIDR-205ENST00000518060 CDX2Q99626 313 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-205ENST00000518060 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
SPIDR-205ENST00000518060 CXXC1Q9P0U4 656 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-205ENST00000518060 BAZ2BQ9UIF8 2168 aaKnown RBP12.17□□□□□ -0.46
SPIDR-205ENST00000518060 SPDYE3A6NKU9 549 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 HMGB1P09429 215 aaKnown RBP12.16□□□□□ -0.46
SPIDR-205ENST00000518060 ACTN1P12814 892 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 CPA1P15085 419 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 FOSL2P15408 326 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 PBX2P40425 430 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 NAPAP54920 295 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 SP2Q02086 613 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 HSDL1Q3SXM5 330 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 MYSM1Q5VVJ2 828 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 GDF6Q6KF10 455 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-205ENST00000518060 APOA5Q6Q788 366 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 NLRX1Q86UT6 975 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 MYLIPQ8WY64 445 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 HERVK_113Q902F9 699 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 KAT2BQ92831 832 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 TTYH1Q9H313 450 aaPredicted RBP12.16□□□□□ -0.46
SPIDR-205ENST00000518060 PKD2L1Q9P0L9 805 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 HDAC6Q9UBN7 1215 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 MSRAQ9UJ68 235 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 BRPF3Q9ULD4 1205 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 SLC4A7Q9Y6M7 1214 aa12.16□□□□□ -0.46
SPIDR-205ENST00000518060 PIK3CDO00329 1044 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 FIBPO43427 364 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 STAM2O75886 525 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 REC8O95072 547 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 F2P00734 622 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 PFKMP08237 780 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 TGFB3P10600 412 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.46
SPIDR-205ENST00000518060 RAB30Q15771 203 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 UTP14CQ5TAP6 766 aaKnown RBP12.15□□□□□ -0.46
SPIDR-205ENST00000518060 PCNX4Q63HM2 1172 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 BLOC1S2Q6QNY1 142 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 CYFIP1Q7L576 1253 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 PBX4Q9BYU1 374 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.46
SPIDR-205ENST00000518060 FRMPD4Q14CM0 1322 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 TMEM265A0A087WTH1 108 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 MEIS2O14770 477 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 IQCF3P0C7M6 154 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 RFC2P35250 354 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 METAP2P50579 478 aaKnown RBP eCLIP12.14□□□□□ -0.47
SPIDR-205ENST00000518060 ADCY7P51828 1080 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 RABGGTBP53611 331 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 EXOSC10Q01780 885 aaKnown RBP12.14□□□□□ -0.47
SPIDR-205ENST00000518060 APOBRQ0VD83 1088 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 NEDD9Q14511 834 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 RASIP1Q5U651 963 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 WWC2Q6AWC2 1192 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 XRRA1Q6P2D8 792 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 Q6ZUG5 572 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 MAFAQ8NHW3 353 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-205ENST00000518060 CAGE1Q8TC20 777 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 BRF1Q92994 677 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 INPP4AQ96PE3 977 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-205ENST00000518060 ZNF576Q9H609 170 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 GTF2IRD1Q9UHL9 959 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 V9GY48 417 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-205ENST00000518060 SCN10AQ9Y5Y9 1956 aa12.14□□□□□ -0.47
SPIDR-205ENST00000518060 SPATA31C2B4DYI2 1134 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 LGALS2P05162 132 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 SELPP16109 830 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 ATP2A2P16615 1042 aaKnown RBP12.13□□□□□ -0.47
SPIDR-205ENST00000518060 ZNF200P98182 395 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-205ENST00000518060 MTMR1Q13613 665 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 GRIN2CQ14957 1233 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 TSGA10IPQ3SY00 556 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 LRRC8DQ7L1W4 858 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 SESTD1Q86VW0 696 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 PGBD1Q96JS3 809 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 NKX2-4Q9H2Z4 354 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 BCAS3Q9H6U6 928 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 SLC28A3Q9HAS3 691 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
SPIDR-205ENST00000518060 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 SNX14Q9Y5W7 946 aa12.13□□□□□ -0.47
SPIDR-205ENST00000518060 LAMA2P24043 3122 aaKnown RBP12.13□□□□□ -0.47
SPIDR-205ENST00000518060 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 C17orf102A2RUQ5 167 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 H3BRB1 525 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 PSMA5P28066 241 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 ICAM3P32942 547 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 HSPA4P34932 840 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 THPOP40225 353 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms