RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 ACTR10Q9NZ32 417 aa6.17□□□□□ -1.42
PVT1-205ENST00000517790 TMOD2Q9NZR1 351 aa6.17□□□□□ -1.42
PVT1-205ENST00000517790 LRFN2Q9ULH4 789 aa6.17□□□□□ -1.42
PVT1-205ENST00000517790 NOB1Q9ULX3 412 aaKnown RBP6.17□□□□□ -1.42
PVT1-205ENST00000517790 MAPRE3Q9UPY8 281 aa6.17□□□□□ -1.42
PVT1-205ENST00000517790 CHMP3Q9Y3E7 222 aa6.17□□□□□ -1.42
PVT1-205ENST00000517790 RABGAP1Q9Y3P9 1069 aa6.17□□□□□ -1.42
PVT1-205ENST00000517790 SYNGAP1Q96PV0 1343 aa6.17□□□□□ -1.42
PVT1-205ENST00000517790 CACNA1AO00555 2505 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 TRIM75PA6NK02 468 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 PHF20L1A8MW92 1017 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 CBFA2T2O43439 604 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 RFPL3O75679 317 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 DDX58O95786 925 aaKnown RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 CFHP08603 1231 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 RBP3P10745 1247 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 EPB42P16452 691 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 TYRP1P17643 537 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 PTPRAP18433 802 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 RRM1P23921 792 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 DDIT3P35638 169 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 RTP1P59025 263 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 SMAD3P84022 425 aaKnown RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 FOXO4P98177 505 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 CACNB2Q08289 660 aaPredicted RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 GCKRQ14397 625 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 CDC37Q16543 378 aaPredicted RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 CCL14Q16627 93 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 FKBP1CQ5VVH2 108 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 G2E3Q7L622 706 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 FASTKD5Q7L8L6 764 aaKnown RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 ALYREFQ86V81 257 aaKnown RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 ZNF354CQ86Y25 554 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 RIN3Q8TB24 985 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 BADQ92934 168 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 SKA1Q96BD8 255 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 ZNF669Q96BR6 464 aaPredicted RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 CHMP4CQ96CF2 233 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 SNX27Q96L92 541 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 TMEM74Q96NL1 305 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 ASB2Q96Q27 587 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 UHRF1Q96T88 793 aaPredicted RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 LRRC27Q9C0I9 530 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 TSPAN10Q9H1Z9 355 aaPredicted RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 YY1AP1Q9H869 796 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 AASDHPPTQ9NRN7 309 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 C9orf78Q9NZ63 289 aaPredicted RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 PUF60Q9UHX1 559 aaKnown RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 SLC27A5Q9Y2P5 690 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 AFG3L2Q9Y4W6 797 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 PCDHB11Q9Y5F2 797 aa6.16□□□□□ -1.42
PVT1-205ENST00000517790 RPAP1Q9BWH6 1393 aaPredicted RBP6.16□□□□□ -1.42
PVT1-205ENST00000517790 RLFQ13129 1914 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 ANO9A1A5B4 782 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 GOLGA6L3A6NEY3 463 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 GSG1L2A8MUP6 293 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 MINDY4BA8MYZ0 360 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 BACH1O14867 736 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 PIP5K1CO60331 668 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 GREM1O60565 184 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 PLCG2P16885 1265 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 GBP2P32456 591 aaPredicted RBP6.15□□□□□ -1.42
PVT1-205ENST00000517790 EPHB4P54760 987 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 NEXNQ0ZGT2 675 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 IFIT5Q13325 482 aaKnown RBP6.15□□□□□ -1.42
PVT1-205ENST00000517790 MTMR1Q13613 665 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 PDE3AQ14432 1141 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 KRT72Q14CN4 511 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 PUM3Q15397 648 aaKnown RBP6.15□□□□□ -1.42
PVT1-205ENST00000517790 CCDC85BQ15834 202 aaPredicted RBP6.15□□□□□ -1.42
PVT1-205ENST00000517790 FAM110CQ1W6H9 321 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 TMEM67Q5HYA8 995 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 EPHA10Q5JZY3 1008 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 CXorf57Q6NSI4 855 aaKnown RBP6.15□□□□□ -1.42
PVT1-205ENST00000517790 CDC42EP5Q6NZY7 148 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 LDHAL6AQ6ZMR3 332 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 MMS22LQ6ZRQ5 1243 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 TOGARAM2Q6ZUX3 1019 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 SH3BP5LQ7L8J4 393 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 SH3RF1Q7Z6J0 888 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 SCYL3Q8IZE3 742 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 TSPYL6Q8N831 410 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 EPS8L3Q8TE67 593 aaKnown RBP6.15□□□□□ -1.42
PVT1-205ENST00000517790 FAM151AQ8WW52 585 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 CCDC74AQ96AQ1 378 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 SERINC2Q96SA4 455 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 LRFN3Q9BTN0 628 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 PUS3Q9BZE2 481 aaKnown RBP6.15□□□□□ -1.42
PVT1-205ENST00000517790 CSRNP2Q9H175 543 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 ALDH8A1Q9H2A2 487 aaPredicted RBP6.15□□□□□ -1.42
PVT1-205ENST00000517790 EPHX3Q9H6B9 360 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 RETREG1Q9H6L5 497 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 PRDM5Q9NQX1 630 aaPredicted RBP6.15□□□□□ -1.42
PVT1-205ENST00000517790 ZMYM5Q9UJ78 669 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 ZNF180Q9UJW8 692 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 PRDM4Q9UKN5 801 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 ATP11BQ9Y2G3 1177 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 SLC45A1Q9Y2W3 748 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 DAGLAQ9Y4D2 1042 aa6.15□□□□□ -1.42
PVT1-205ENST00000517790 IPPQ9Y573 584 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms