RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 GPM6BQ13491 265 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 VPS53Q5VIR6 699 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 MIER1Q8N108 512 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 SYTL5Q8TDW5 730 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 MFSD14AQ96MC6 490 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 YME1L1Q96TA2 773 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 POP1Q99575 1024 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 PPFIA4O75335 1185 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 HOXD8P13378 290 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 MX1P20591 662 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 THPOP40225 353 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 CDC37Q16543 378 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 PLEKHG4Q58EX7 1191 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 TCEAL5Q5H9L2 206 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 ARHGEF16Q5VV41 709 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 KCNV1Q6PIU1 500 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 EP400NLQ6ZTU2 488 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 SERINC5Q86VE9 423 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 FBXO11Q86XK2 927 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 DBF4BQ8NFT6 615 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 TAAR1Q96RJ0 339 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 HELLSQ9NRZ9 838 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 ATG2AQ2TAZ0 1938 aa13.4□□□□□ -0.26
TRAPPC9-203ENST00000517667 TRIOO75962 3097 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 CAND2O75155 1236 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 FGAP02671 866 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 NT5C2P49902 561 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 TMEM192Q8IY95 271 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 SEPT8Q92599 483 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 WNT8BQ93098 351 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 TOP1MTQ969P6 601 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 CLDND1Q9NY35 253 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 COL20A1Q9P218 1284 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 MRPL11Q9Y3B7 192 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 LAMA4Q16363 1823 aa13.39□□□□□ -0.27
TRAPPC9-203ENST00000517667 C5orf42Q9H799 3197 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 GOLGA8HP0CJ92 632 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 HSPD1P10809 573 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 EIF2AK2P19525 551 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 SMAD2Q15796 467 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 HFE2Q6ZVN8 426 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 TICAM2Q86XR7 235 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 APBB2Q92870 758 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 EVI5LQ96CN4 794 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 SNX27Q96L92 541 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 LMAN2LQ9H0V9 348 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 PXMP2Q9NR77 195 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 RWDD3Q9Y3V2 267 aa13.38□□□□□ -0.27
TRAPPC9-203ENST00000517667 C17orf102A2RUQ5 167 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 NR3C2P08235 984 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 IRS1P35568 1242 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 ZNF200P98182 395 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 CCDC178Q5BJE1 867 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 HERC4Q5GLZ8 1057 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 C20orf194Q5TEA3 1177 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 MYSM1Q5VVJ2 828 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 RPAINQ86UA6 219 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 DGKHQ86XP1 1220 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 TBC1D5Q92609 795 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 ESR2Q92731 530 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 ATP6V0A1Q93050 837 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 SPATA33Q96N06 139 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 C11orf84Q9BUA3 381 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 IFIH1Q9BYX4 1025 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 USP34Q70CQ2 3546 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 CCDC171Q6TFL3 1326 aa13.37□□□□□ -0.27
TRAPPC9-203ENST00000517667 C5orf67F2Z3F1 127 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 UPP2O95045 317 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 RB1P06400 928 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 TGFB3P10600 412 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 HOXC8P31273 242 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 PKN1Q16512 942 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 CTC1Q2NKJ3 1217 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 HSDL1Q3SXM5 330 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 MCMDC2Q4G0Z9 681 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 ASPRV1Q53RT3 343 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 CELF3Q5SZQ8 465 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 IQCA1Q86XH1 822 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 ADGRF4Q8IZF3 695 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 FIBCD1Q8N539 461 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 PNMA1Q8ND90 353 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 OTUD7AQ8TE49 926 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 PRRX2Q99811 253 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 UBA5Q9GZZ9 404 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 CPVLQ9H3G5 476 aa13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 MAP3K20Q9NYL2 800 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-203ENST00000517667 H3BRB1 525 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 DHX16O60231 1041 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 GGPS1O95749 300 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 CFBP00751 764 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 GNAT1P11488 350 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 CTNNB1P35222 781 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 LTBRP36941 435 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 HSD17B4P51659 736 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 HAND2P61296 217 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 GHRHRQ02643 423 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms