RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 MRVI1Q9Y6F6 885 aa11.25□□□□□ -0.61
CLN8-202ENST00000517514 MSH4O15457 936 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 DHX15O43143 795 aaKnown RBP11.24□□□□□ -0.61
CLN8-202ENST00000517514 STAM2O75886 525 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 KCNA2P16389 499 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 SMPD1P17405 629 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 ATP2B1P20020 1258 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 TRAPPC10P48553 1259 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 IRX5P78411 483 aaPredicted RBP11.24□□□□□ -0.61
CLN8-202ENST00000517514 ITGB3BPQ13352 177 aaPredicted RBP11.24□□□□□ -0.61
CLN8-202ENST00000517514 MTFR1Q15390 333 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 ZNF174Q15697 407 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 CCDC144BQ3MJ40 725 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 TTC38Q5R3I4 469 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 SEPT14Q6ZU15 432 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 PLA2G4DQ86XP0 818 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 POTEDQ86YR6 584 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 HAS1Q92839 578 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 GPRASP2Q96D09 838 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 MTMR9Q96QG7 549 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 MCOLN1Q9GZU1 580 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 ZSCAN16Q9H4T2 348 aaPredicted RBP11.24□□□□□ -0.61
CLN8-202ENST00000517514 KCNMB3Q9NPA1 279 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.24□□□□□ -0.61
CLN8-202ENST00000517514 KCNH7Q9NS40 1196 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 DDX41Q9UJV9 622 aaKnown RBP11.24□□□□□ -0.61
CLN8-202ENST00000517514 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
CLN8-202ENST00000517514 GNEQ9Y223 722 aaKnown RBP11.24□□□□□ -0.61
CLN8-202ENST00000517514 CLIC4Q9Y696 253 aa11.24□□□□□ -0.61
CLN8-202ENST00000517514 CTAGE5O15320 804 aa11.23□□□□□ -0.61
CLN8-202ENST00000517514 CCNT1O60563 726 aaKnown RBP11.23□□□□□ -0.61
CLN8-202ENST00000517514 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
CLN8-202ENST00000517514 GNL2Q13823 731 aaKnown RBP11.23□□□□□ -0.61
CLN8-202ENST00000517514 PTPAQ15257 358 aa11.23□□□□□ -0.61
CLN8-202ENST00000517514 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
CLN8-202ENST00000517514 IL17AQ16552 155 aa11.23□□□□□ -0.61
CLN8-202ENST00000517514 LY6KQ17RY6 165 aa11.23□□□□□ -0.61
CLN8-202ENST00000517514 PRR16Q569H4 304 aa11.23□□□□□ -0.61
CLN8-202ENST00000517514 SLC5A5Q92911 643 aa11.23□□□□□ -0.61
CLN8-202ENST00000517514 ARMC5Q96C12 935 aa11.23□□□□□ -0.61
CLN8-202ENST00000517514 USP28Q96RU2 1077 aa11.23□□□□□ -0.61
CLN8-202ENST00000517514 UNC93B1Q9H1C4 597 aa11.23□□□□□ -0.61
CLN8-202ENST00000517514 AGO4Q9HCK5 861 aaKnown RBP11.23□□□□□ -0.61
CLN8-202ENST00000517514 DDX25Q9UHL0 483 aaKnown RBP11.23□□□□□ -0.61
CLN8-202ENST00000517514 ZHX1Q9UKY1 873 aaPredicted RBP11.23□□□□□ -0.61
CLN8-202ENST00000517514 B4DLN1 442 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 SEPT4O43236 478 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 FIBPO43427 364 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 GCFC2P16383 781 aaKnown RBP11.22□□□□□ -0.61
CLN8-202ENST00000517514 UBA1P22314 1058 aaKnown RBP11.22□□□□□ -0.61
CLN8-202ENST00000517514 MCM7P33993 719 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 ZNF76P36508 570 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 NUCB2P80303 420 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 ARHGAP1Q07960 439 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 MTMR1Q13613 665 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 FOXD4L6Q3SYB3 417 aaPredicted RBP11.22□□□□□ -0.61
CLN8-202ENST00000517514 SLC9C1Q4G0N8 1177 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 DUSP28Q4G0W2 176 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 RILPL1Q5EBL4 403 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 ANO1Q5XXA6 986 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 LHX8Q68G74 356 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 IQSEC1Q6DN90 963 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 B3GNT9Q6UX72 402 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 FOXD4L3Q6VB84 417 aaPredicted RBP11.22□□□□□ -0.61
CLN8-202ENST00000517514 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 ZNF333Q96JL9 665 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 CHMP5Q9NZZ3 219 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 TFIP11Q9UBB9 837 aaKnown RBP11.22□□□□□ -0.61
CLN8-202ENST00000517514 CNPY2Q9Y2B0 182 aa11.22□□□□□ -0.61
CLN8-202ENST00000517514 SORBS3O60504 671 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 PSMD10O75832 226 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 CCNE2O96020 404 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 TXNP10599 105 aaKnown RBP11.21□□□□□ -0.61
CLN8-202ENST00000517514 TGFB3P10600 412 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 CCL5P13501 91 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 ATP2C1P98194 919 aaPredicted RBP11.21□□□□□ -0.61
CLN8-202ENST00000517514 TNFAIP2Q03169 654 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 DNM1Q05193 864 aaKnown RBP11.21□□□□□ -0.61
CLN8-202ENST00000517514 SPIRE1Q08AE8 756 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 SF3A1Q15459 793 aaKnown RBP11.21□□□□□ -0.61
CLN8-202ENST00000517514 COL13A1Q5TAT6 717 aaPredicted RBP11.21□□□□□ -0.61
CLN8-202ENST00000517514 NLRX1Q86UT6 975 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
CLN8-202ENST00000517514 PAK6Q9NQU5 681 aaPredicted RBP11.21□□□□□ -0.61
CLN8-202ENST00000517514 PKD2L1Q9P0L9 805 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 DAXXQ9UER7 740 aaPredicted RBP11.21□□□□□ -0.61
CLN8-202ENST00000517514 VAV3Q9UKW4 847 aa11.21□□□□□ -0.61
CLN8-202ENST00000517514 NOL7Q9UMY1 257 aaKnown RBP11.21□□□□□ -0.61
CLN8-202ENST00000517514 NFASCO94856 1347 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 MYADML2A6NDP7 307 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 IPO5O00410 1097 aaKnown RBP11.2□□□□□ -0.62
CLN8-202ENST00000517514 MAFGO15525 162 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 NEMFO60524 1076 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 FARP2O94887 1054 aaPredicted RBP11.2□□□□□ -0.62
CLN8-202ENST00000517514 MYCP01106 439 aaPredicted RBP11.2□□□□□ -0.62
CLN8-202ENST00000517514 AKR1A1P14550 325 aa11.2□□□□□ -0.62
CLN8-202ENST00000517514 NASPP49321 788 aaPredicted RBP11.2□□□□□ -0.62
CLN8-202ENST00000517514 NKX3-2P78367 333 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms