RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 SREBF2Q12772 1141 aa17.52■□□□□ 0.39
TRPS1-206ENST00000517323 SEMA3FQ13275 785 aa17.52■□□□□ 0.39
TRPS1-206ENST00000517323 ITGB3BPQ13352 177 aaPredicted RBP17.52■□□□□ 0.39
TRPS1-206ENST00000517323 ECM1Q16610 540 aa17.52■□□□□ 0.39
TRPS1-206ENST00000517323 VSIG10LQ86VR7 867 aa17.52■□□□□ 0.39
TRPS1-206ENST00000517323 PFASO15067 1338 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 EML1O00423 815 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 PTMSP20962 102 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 MTMR1Q13613 665 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 NCAPH2Q6IBW4 605 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 C17orf99Q6UX52 265 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 ZNF577Q9BSK1 485 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 MROH8Q9H579 483 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 EHMT1Q9H9B1 1298 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 SERTAD1Q9UHV2 236 aa17.51■□□□□ 0.39
TRPS1-206ENST00000517323 PRPHP41219 470 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 SPIRE1Q08AE8 756 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 NOGQ13253 232 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 MCTP2Q6DN12 878 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 SEPT14Q6ZU15 432 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 IGSF22Q8N9C0 903 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 LRWD1Q9UFC0 647 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 UBIAD1Q9Y5Z9 338 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 DNAJC25-GNG10A0A024R161 153 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 IPO5O00410 1097 aaKnown RBP17.5■□□□□ 0.39
TRPS1-206ENST00000517323 LAD1O00515 517 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 SP4Q02446 784 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 ZNF579Q8NAF0 562 aaKnown RBP17.5■□□□□ 0.39
TRPS1-206ENST00000517323 MAP3K20Q9NYL2 800 aaKnown RBP17.5■□□□□ 0.39
TRPS1-206ENST00000517323 VAV3Q9UKW4 847 aa17.5■□□□□ 0.39
TRPS1-206ENST00000517323 TRPA1O75762 1119 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 CCND2P30279 289 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 LONP1P36776 959 aaKnown RBP17.49■□□□□ 0.39
TRPS1-206ENST00000517323 CCNA1P78396 465 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 SP2Q02086 613 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 CYP4A11Q02928 519 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 MOXD1Q6UVY6 613 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 RASSF8Q8NHQ8 419 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 NUP62CLQ9H1M0 184 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 KINO60870 393 aaKnown RBP17.49■□□□□ 0.39
TRPS1-206ENST00000517323 PRR29P0C7W0 189 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 INHBEP58166 350 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 LRCH2Q5VUJ6 765 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 TRMT1LQ7Z2T5 733 aaKnown RBP17.49■□□□□ 0.39
TRPS1-206ENST00000517323 FBXO16Q8IX29 292 aaPredicted RBP17.49■□□□□ 0.39
TRPS1-206ENST00000517323 ZFYVE28Q9HCC9 887 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 JADE2Q9NQC1 790 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 FAM13BQ9NYF5 915 aa17.49■□□□□ 0.39
TRPS1-206ENST00000517323 UBA7P41226 1012 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 AFMP43652 599 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRPS1-206ENST00000517323 PNOCQ13519 176 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 DHX8Q14562 1220 aaKnown RBP17.48■□□□□ 0.39
TRPS1-206ENST00000517323 CCDC183Q5T5S1 534 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 ISM2Q6H9L7 571 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 KCNK18Q7Z418 384 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 CABP7Q86V35 215 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 SHCBP1Q8NEM2 672 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 TNMDQ9H2S6 317 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 CLSTN2Q9H4D0 955 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 AGO4Q9HCK5 861 aaKnown RBP17.48■□□□□ 0.39
TRPS1-206ENST00000517323 RGL1Q9NZL6 768 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 IVNS1ABPQ9Y6Y0 642 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 MGAMO43451 1857 aa17.48■□□□□ 0.39
TRPS1-206ENST00000517323 DHX15O43143 795 aaKnown RBP17.47■□□□□ 0.39
TRPS1-206ENST00000517323 ACTN4O43707 911 aaKnown RBP17.47■□□□□ 0.39
TRPS1-206ENST00000517323 PSMD10O75832 226 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 TMEM266Q2M3C6 531 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 NAALADL2Q58DX5 795 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 NPLOC4Q8TAT6 608 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 GTF3C2Q8WUA4 911 aaPredicted RBP17.47■□□□□ 0.39
TRPS1-206ENST00000517323 SLC5A5Q92911 643 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 UNC45AQ9H3U1 944 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 PDGFCQ9NRA1 345 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 TSKSQ9UJT2 592 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 FAM237AA0A1B0GTK4 181 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 POTEB3A0JP26 581 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 CA12O43570 354 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 GAS7O60861 476 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 PLCG1P19174 1290 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 PDE4DQ08499 809 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 POTEBQ6S5H4 581 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 OTOP1Q7RTM1 612 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 PLEKHH3Q7Z736 793 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 GAS2L3Q86XJ1 694 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 SNX29Q8TEQ0 813 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 PNMA5Q96PV4 448 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 MTRQ99707 1265 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 SDF4Q9BRK5 362 aa17.47■□□□□ 0.39
TRPS1-206ENST00000517323 MORC2Q9Y6X9 1032 aaPredicted RBP17.47■□□□□ 0.39
TRPS1-206ENST00000517323 ZBTB39O15060 712 aa17.46■□□□□ 0.39
TRPS1-206ENST00000517323 MED24O75448 989 aa17.46■□□□□ 0.39
TRPS1-206ENST00000517323 GRB10Q13322 594 aa17.46■□□□□ 0.39
TRPS1-206ENST00000517323 ORC2Q13416 577 aaPredicted RBP17.46■□□□□ 0.39
TRPS1-206ENST00000517323 E2F4Q16254 413 aa17.46■□□□□ 0.39
TRPS1-206ENST00000517323 CCL14Q16627 93 aa17.46■□□□□ 0.39
TRPS1-206ENST00000517323 GJC2Q5T442 439 aaPredicted RBP17.46■□□□□ 0.39
TRPS1-206ENST00000517323 KRBA2Q6ZNG9 492 aa17.46■□□□□ 0.39
TRPS1-206ENST00000517323 DPP9Q86TI2 863 aa17.46■□□□□ 0.39
TRPS1-206ENST00000517323 SAMD3Q8N6K7 520 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms