RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 ADCY3O60266 1144 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 GRK2P25098 689 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 GRK3P35626 688 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 DLX2Q07687 328 aaPredicted RBP4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 SERINC3Q13530 473 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 RASA3Q14644 834 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 LBX2Q6XYB7 198 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 SAPCD2Q86UD0 394 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 ZC3H18Q86VM9 953 aaKnown RBP4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 ARRDC4Q8NCT1 418 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 PIP4K2CQ8TBX8 421 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 ZNF669Q96BR6 464 aaPredicted RBP4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 DEPDC7Q96QD5 511 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 CCDC113Q9H0I3 377 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 CDIP1Q9H305 208 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 LUC7LQ9NQ29 371 aaKnown RBP4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 SNTG2Q9NY99 539 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 MYOTQ9UBF9 498 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 TRAF6Q9Y4K3 522 aa4.99□□□□□ -1.61
SNORA40.12-201ENST00000516329 ASXL2Q76L83 1435 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 A0A0G2JLL6 359 aaPredicted RBP4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 TCRBV5S2A0A599 114 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 FAM221BA6H8Z2 402 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 FAM153BP0C7A2 387 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 SLURP1P55000 103 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 CTSWP56202 376 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 GPR85P60893 370 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 SF3A1Q15459 793 aaKnown RBP4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 KIZQ2M2Z5 673 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 EMC4Q5J8M3 183 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 FAM209AQ5JX71 171 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 FOXB2Q5VYV0 432 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 STYK1Q6J9G0 422 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 LILRA6Q6PI73 481 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 RSPO2Q6UXX9 243 aaPredicted RBP4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 ARMC5Q96C12 935 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 C20orf173Q96LM9 149 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 DNAJC2Q99543 621 aaKnown RBP4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 XYLT2Q9H1B5 865 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 ADAM7Q9H2U9 754 aa4.98□□□□□ -1.61
SNORA40.12-201ENST00000516329 KDM2BQ8NHM5 1336 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 TRBV23-1A0A0A0MS06 115 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 SLC27A2O14975 620 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 SMARCA5O60264 1052 aaPredicted RBP4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 TADA3O75528 432 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 GNAT1P11488 350 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 COL6A2P12110 1019 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 KCNC1P48547 511 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 ITGA1P56199 1179 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 CAP1Q01518 475 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 RBM12BQ8IXT5 1001 aaKnown RBP4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 IFNL3Q8IZI9 196 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 ZSWIM3Q96MP5 696 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 IPO9Q96P70 1041 aaKnown RBP4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 SRPK1Q96SB4 655 aaKnown RBP4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 C11orf84Q9BUA3 381 aaPredicted RBP4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 SPATA6Q9NWH7 488 aaPredicted RBP4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 DTLQ9NZJ0 730 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 NTMQ9P121 344 aa4.97□□□□□ -1.61
SNORA40.12-201ENST00000516329 SH3D21A4FU49 640 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 KRIT1O00522 736 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 SOD2P04179 222 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 THBS2P35442 1172 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 SUMO1P63165 101 aaKnown RBP4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 NKX3-2P78367 333 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 GRIN1Q05586 938 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 RBL2Q08999 1139 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 CR1LQ2VPA4 569 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 NT5DC1Q5TFE4 455 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 OTOP3Q7RTS5 596 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 MTDHQ86UE4 582 aaKnown RBP4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 CARFQ8N187 725 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 ZBTB38Q8NAP3 1195 aaPredicted RBP4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 TOE1Q96GM8 510 aaKnown RBP4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 EXOC2Q96KP1 924 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 ZFYVE21Q9BQ24 234 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 ALG1Q9BT22 464 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 SMOC1Q9H4F8 434 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 IPPKQ9H8X2 491 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 USP40Q9NVE5 1235 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 RAPGEFL1Q9UHV5 662 aa4.96□□□□□ -1.62
SNORA40.12-201ENST00000516329 KRTAP9-7A8MTY7 169 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 NKRFO15226 690 aaKnown RBP eCLIP4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 MAFKO60675 156 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 LTFP02788 710 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 SARSP49591 514 aaKnown RBP4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 NFIXQ14938 502 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 TEPPQ6URK8 271 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 TMC5Q6UXY8 1006 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 TTLL7Q6ZT98 887 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 SCUBE1Q8IWY4 988 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 LINC00482Q8N8I6 264 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 KYQ8NBH2 561 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 SREK1Q8WXA9 508 aaKnown RBP4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 DNAJC7Q99615 494 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 SLC6A20Q9NP91 592 aa4.95□□□□□ -1.62
SNORA40.12-201ENST00000516329 RBPJLQ9UBG7 517 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms