RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 CNOT6Q9ULM6 557 aaKnown RBP-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LHX6Q9UPM6 363 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TRIM35Q9UPQ4 493 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MAPK8IP1Q9UQF2 711 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CLEC11AQ9Y240 323 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ADAM18Q9Y3Q7 739 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DYRK1BQ9Y463 629 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KCTD3Q9Y597 815 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 UBIAD1Q9Y5Z9 338 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 VPS13CQ709C8 3753 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CEP290O15078 2479 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DNAH8Q96JB1 4490 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LAMC1P11047 1609 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SCN1AP35498 2009 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PLCE1Q9P212 2302 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RAI1Q7Z5J4 1906 aaPredicted RBP-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 F5P12259 2224 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 USF3Q68DE3 2245 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SPAG17Q6Q759 2223 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MAP2P11137 1827 aaKnown RBP-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LAMA4Q16363 1823 aa-0.54□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DOCK10Q96BY6 2186 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TTC3P53804 2025 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TET2Q6N021 2002 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 COL4A1P02462 1669 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF521Q96K83 1311 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LTBP4Q8N2S1 1624 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TICRRQ7Z2Z1 1910 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 IGKV1OR2-108A0A075B7D4 117 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 A0A087X002 238 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 VPS37CA5D8V6 355 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 C2orf72A6NCS6 295 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CBY3A6NI87 242 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF233A6NK53 670 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ELOA3DA6NLF2 546 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 C4orf47A7E2U8 309 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 VWC2LB2RUY7 222 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CFAP99D6REC4 459 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PI4K2BG5E9Z4 385 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 GPR25O00155 361 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 WWP2O00308 870 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DDX3XO00571 662 aaKnown RBP eCLIP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KLF11O14901 512 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 U2SURPO15042 1029 aaKnown RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MUSKO15146 869 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZBTB7BO15156 539 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF185O15231 689 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CAPN5O15484 640 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DDX3YO15523 660 aaKnown RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ASAP2O43150 1006 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZG16O60844 167 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DIAPH2O60879 1101 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LDB3O75112 727 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SEC24DO94855 1032 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF432O94892 652 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 WISP1O95388 367 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TGDSO95455 350 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DLGAP3O95886 979 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ECDO95905 644 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MT1AP04731 61 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SNRNP70P08621 437 aaKnown RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CD48P09326 243 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ELFN1P0C7U0 828 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LYNX1P0DP58 116 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MGMTP16455 207 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PRKCAP17252 672 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PI3P19957 117 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 AMY2BP19961 511 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CSRP1P21291 193 aaKnown RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TGM2P21980 687 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PTGS1P23219 599 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SP100P23497 879 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 GATA2P23769 480 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ITGA3P26006 1051 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CD34P28906 385 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ALDH1B1P30837 517 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 BMP8BP34820 402 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 NOS2P35228 1153 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ADCY8P40145 1251 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 USP5P45974 858 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RPL34P49207 117 aaKnown RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SELENOPP49908 381 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF143P52747 638 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LIMK2P53671 638 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 EPHB1P54762 984 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 GDF10P55107 478 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 BRPF1P55201 1214 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LINC00315P59091 139 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 BPIFB4P59827 614 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CTAG1AP78358 180 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MT1XP80297 61 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PTH1RQ03431 593 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KHDRBS1Q07666 443 aaKnown RBP eCLIP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF252P-AS1Q0IIN9 211 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 NFIAQ12857 509 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SEMA3AQ14563 771 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LAGE3Q14657 143 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ICAM4Q14773 271 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FAM98CQ17RN3 349 aaKnown RBP-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms