RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 VAT1LQ9HCJ6 419 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 CD320Q9NPF0 282 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 INSL6Q9Y581 213 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 EMSYQ7Z589 1322 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 MICAL3Q7RTP6 2002 aa18.37■□□□□ 0.53
LMNA-223ENST00000515459 PPFIA4O75335 1185 aa18.36■□□□□ 0.53
LMNA-223ENST00000515459 ZNF200P98182 395 aaPredicted RBP18.36■□□□□ 0.53
LMNA-223ENST00000515459 MBTPS1Q14703 1052 aa18.36■□□□□ 0.53
LMNA-223ENST00000515459 WNT8BQ93098 351 aa18.36■□□□□ 0.53
LMNA-223ENST00000515459 FAM86C2PA6NEL3 165 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 AMHP03971 560 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 MYCLP12524 364 aaPredicted RBP18.35■□□□□ 0.53
LMNA-223ENST00000515459 HOXD8P13378 290 aaPredicted RBP18.35■□□□□ 0.53
LMNA-223ENST00000515459 SDSP20132 328 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 KCNA5P22460 613 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 HSD17B4P51659 736 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 LEXMQ3ZCV2 418 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 KCNV1Q6PIU1 500 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.35■□□□□ 0.536e-6■□□□□ 8.1
LMNA-223ENST00000515459 ENAHQ8N8S7 591 aaPredicted RBP18.35■□□□□ 0.53
LMNA-223ENST00000515459 FBXO22Q8NEZ5 403 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 AMNQ9BXJ7 453 aa18.35■□□□□ 0.53
LMNA-223ENST00000515459 MAP3K20Q9NYL2 800 aaKnown RBP18.35■□□□□ 0.53
LMNA-223ENST00000515459 RSPH10B2B2RC85 870 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 B4E1Z4 1266 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 RSPH10BP0C881 870 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 GHRHRQ02643 423 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 HDAC1Q13547 482 aaPredicted RBP18.34■□□□□ 0.53
LMNA-223ENST00000515459 HSDL1Q3SXM5 330 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 FAM178BQ8IXR5 827 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 MYOCDQ8IZQ8 938 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 GJD3Q8N144 294 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 DBF4BQ8NFT6 615 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.34■□□□□ 0.53
LMNA-223ENST00000515459 SPATA33Q96N06 139 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 PDCD2LQ9BRP1 358 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 C17orf80Q9BSJ5 609 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 ZSWIM5Q9P217 1185 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 CTNNA3Q9UI47 895 aa18.34■□□□□ 0.53
LMNA-223ENST00000515459 OPLAHO14841 1288 aa18.33■□□□□ 0.52
LMNA-223ENST00000515459 RGS20O76081 388 aa18.33■□□□□ 0.52
LMNA-223ENST00000515459 GGPS1O95749 300 aa18.33■□□□□ 0.52
LMNA-223ENST00000515459 THPOP40225 353 aa18.33■□□□□ 0.52
LMNA-223ENST00000515459 HTRA4P83105 476 aaPredicted RBP18.33■□□□□ 0.52
LMNA-223ENST00000515459 HIC1Q14526 733 aa18.33■□□□□ 0.52
LMNA-223ENST00000515459 CELF3Q5SZQ8 465 aaKnown RBP18.33■□□□□ 0.52
LMNA-223ENST00000515459 SERINC5Q86VE9 423 aa18.33■□□□□ 0.52
LMNA-223ENST00000515459 LNPKQ9C0E8 428 aa18.33■□□□□ 0.52
LMNA-223ENST00000515459 SORBS3O60504 671 aa18.32■□□□□ 0.52
LMNA-223ENST00000515459 TGFB3P10600 412 aa18.32■□□□□ 0.52
LMNA-223ENST00000515459 MKRN4PQ13434 485 aaPredicted RBP18.32■□□□□ 0.52
LMNA-223ENST00000515459 PGM5Q15124 567 aa18.32■□□□□ 0.52
LMNA-223ENST00000515459 PTPROQ16827 1216 aa18.32■□□□□ 0.52
LMNA-223ENST00000515459 PLEKHG4Q58EX7 1191 aa18.32■□□□□ 0.52
LMNA-223ENST00000515459 STOX1Q6ZVD7 989 aa18.32■□□□□ 0.52
LMNA-223ENST00000515459 SP7Q8TDD2 431 aaPredicted RBP18.32■□□□□ 0.52
LMNA-223ENST00000515459 MRPL38Q96DV4 380 aaKnown RBP18.32■□□□□ 0.52
LMNA-223ENST00000515459 SAMD11Q96NU1 681 aa18.32■□□□□ 0.52
LMNA-223ENST00000515459 C16orf70Q9BSU1 422 aa18.32■□□□□ 0.52
LMNA-223ENST00000515459 NLRC5Q86WI3 1866 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 C17orf102A2RUQ5 167 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 PRR33A8MZF0 331 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 IL9P15248 144 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 SSTR3P32745 418 aaPredicted RBP18.31■□□□□ 0.52
LMNA-223ENST00000515459 RRP1P56182 461 aaKnown RBP18.31■□□□□ 0.52
LMNA-223ENST00000515459 IMMTQ16891 758 aaKnown RBP18.31■□□□□ 0.52
LMNA-223ENST00000515459 EPC2Q52LR7 807 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 PTCRAQ6ISU1 281 aaPredicted RBP18.31■□□□□ 0.52
LMNA-223ENST00000515459 CWC27Q6UX04 472 aaKnown RBP18.31■□□□□ 0.52
LMNA-223ENST00000515459 VSIG10LQ86VR7 867 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 STAG2Q8N3U4 1231 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 SAMD3Q8N6K7 520 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 ATP6V0A1Q93050 837 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 UBAC1Q9BSL1 405 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 KRT23Q9C075 422 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 MLXIPQ9HAP2 919 aa18.31■□□□□ 0.52
LMNA-223ENST00000515459 KLRF2D3W0D1 207 aa18.3■□□□□ 0.52
LMNA-223ENST00000515459 H3BRB1 525 aa18.3■□□□□ 0.52
LMNA-223ENST00000515459 ZBTB5O15062 677 aa18.3■□□□□ 0.52
LMNA-223ENST00000515459 UBA1P22314 1058 aaKnown RBP18.3■□□□□ 0.52
LMNA-223ENST00000515459 HOXA13P31271 388 aaPredicted RBP18.3■□□□□ 0.52
LMNA-223ENST00000515459 SP2Q02086 613 aa18.3■□□□□ 0.52
LMNA-223ENST00000515459 PUS10Q3MIT2 529 aaKnown RBP18.3■□□□□ 0.52
LMNA-223ENST00000515459 TIGD5Q53EQ6 642 aa18.3■□□□□ 0.52
LMNA-223ENST00000515459 IFIT1BQ5T764 474 aaKnown RBP18.3■□□□□ 0.52
LMNA-223ENST00000515459 MTMR8Q96EF0 704 aa18.3■□□□□ 0.52
LMNA-223ENST00000515459 YME1L1Q96TA2 773 aa18.3■□□□□ 0.52
LMNA-223ENST00000515459 TUT1Q9H6E5 874 aaKnown RBP18.3■□□□□ 0.52
LMNA-223ENST00000515459 DIAPH3Q9NSV4 1193 aa18.3■□□□□ 0.52
LMNA-223ENST00000515459 PCDHA1Q9Y5I3 950 aa18.3■□□□□ 0.52
LMNA-223ENST00000515459 GRXCR2A6NFK2 248 aa18.29■□□□□ 0.52
LMNA-223ENST00000515459 PPP1R11O60927 126 aaPredicted RBP18.29■□□□□ 0.52
LMNA-223ENST00000515459 ALADP13716 330 aa18.29■□□□□ 0.52
LMNA-223ENST00000515459 CCND2P30279 289 aa18.29■□□□□ 0.52
LMNA-223ENST00000515459 IL31RAQ8NI17 732 aa18.29■□□□□ 0.52
LMNA-223ENST00000515459 NEK9Q8TD19 979 aa18.29■□□□□ 0.52
LMNA-223ENST00000515459 SEPT8Q92599 483 aa18.29■□□□□ 0.52
LMNA-223ENST00000515459 TOP1MTQ969P6 601 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms