RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 AMY2AP04746 511 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 GNAT1P11488 350 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 PDE6AP16499 860 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 AMY2BP19961 511 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 ARL4AP40617 200 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 MECP2P51608 486 aaKnown RBP7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 PTPROQ16827 1216 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 FAM47CQ5HY64 1035 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 ADGRF1Q5T601 910 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 NETO2Q8NC67 525 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 SH3RF2Q8TEC5 729 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 CHAC2Q8WUX2 184 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 CAAP1Q9H8G2 361 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 SMURF1Q9HCE7 757 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 CATSPERZQ9NTU4 200 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 COL4A3BPQ9Y5P4 624 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 HCFC2Q9Y5Z7 792 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 CARMIL2Q6F5E8 1435 aa7.33□□□□□ -1.24
HMGCS1-207ENST00000514610 NUDT19A8MXV4 375 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 ZNF561-AS1K7EIQ3 104 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 TRAF5O00463 557 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 SGSM2O43147 1006 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 NPTXRO95502 500 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 CYBBP04839 570 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 GLI1P08151 1106 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 FLT3P36888 993 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 SLC6A11P48066 632 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 JAM2P57087 298 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 ST5P78524 1137 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 LACTBP83111 547 aaPredicted RBP7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 RBM10P98175 930 aaKnown RBP7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 AMPD3Q01432 767 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 KCNMB1Q16558 191 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 EMC4Q5J8M3 183 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 FSTL4Q6MZW2 842 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 RPTNQ6XPR3 784 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 UBE2R2Q712K3 238 aaPredicted RBP7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 STRA8Q7Z7C7 330 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 CABP7Q86V35 215 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 OSTM1Q86WC4 334 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 LEO1Q8WVC0 666 aaPredicted RBP7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 WNK4Q96J92 1243 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 ORAI3Q9BRQ5 295 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 TMX1Q9H3N1 280 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 SLC6A20Q9NP91 592 aa7.32□□□□□ -1.24
HMGCS1-207ENST00000514610 ZNF503-AS2A6NEH8 195 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 KCNK3O14649 394 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 TADA3O75528 432 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 APPP05067 770 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 SPIRE1Q08AE8 756 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 RAB3GAP1Q15042 981 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 STEAP3Q658P3 488 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 PAQR3Q6TCH7 311 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 ARHGAP36Q6ZRI8 547 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 RBM12BQ8IXT5 1001 aaKnown RBP7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 UHMK1Q8TAS1 419 aaKnown RBP7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 SLC6A17Q9H1V8 727 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 PCDH12Q9NPG4 1184 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 KLHL14Q9P2G3 628 aa7.31□□□□□ -1.24
HMGCS1-207ENST00000514610 ZNF891A8MT65 544 aaPredicted RBP7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 F8W031 263 aaPredicted RBP7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 BIN1O00499 593 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 MAN2B1O00754 1011 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 MPOP05164 745 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 YBX3P16989 372 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 KRT15P19012 456 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 SOX5P35711 763 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 PDE6BP35913 854 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 GPR19Q15760 415 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 CRY1Q16526 586 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 PLEKHN1Q494U1 663 aaPredicted RBP7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 ANKLE2Q86XL3 938 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 PTRH1Q86Y79 214 aaKnown RBP7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 DCP2Q8IU60 420 aaKnown RBP7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 AHI1Q8N157 1196 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 AFAP1L2Q8N4X5 818 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 CHST14Q8NCH0 376 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 SEC14L1Q92503 715 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 FAM168AQ92567 244 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 LIN37Q96GY3 246 aaPredicted RBP7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 CD244Q9BZW8 370 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 PALD1Q9ULE6 856 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 PLA2G2DQ9UNK4 145 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 TELO2Q9Y4R8 837 aa7.3□□□□□ -1.24
HMGCS1-207ENST00000514610 HGSO14964 777 aaPredicted RBP7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 SLC27A2O14975 620 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 GSTA4O15217 222 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 NCLP19338 710 aaKnown RBP7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 CNGA1P29973 690 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 YBX1P67809 324 aaKnown RBP7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 OTOP1Q7RTM1 612 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 IRF2BP1Q8IU81 584 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 NXPE1Q8N323 547 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 BCAS3Q9H6U6 928 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 B4GALT6Q9UBX8 382 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 DSEQ9UL01 958 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 SRPK3Q9UPE1 567 aa7.29□□□□□ -1.24
HMGCS1-207ENST00000514610 OR14I1A6ND48 311 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 KRIT1O00522 736 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms