RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 PDCD2LQ9BRP1 358 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 MOV10L1Q9BXT6 1211 aaKnown RBP17.98■□□□□ 0.47
NUP54-214ENST00000514307 A1CFQ9NQ94 594 aaKnown RBP17.98■□□□□ 0.47
NUP54-214ENST00000514307 TBC1D22BQ9NU19 505 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 RMND1Q9NWS8 449 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 COL20A1Q9P218 1284 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 DACH1Q9UI36 760 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 PCDHA5Q9Y5H7 936 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 FRMPD4Q14CM0 1322 aa17.98■□□□□ 0.47
NUP54-214ENST00000514307 PAPPA2Q9BXP8 1791 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 A0A087X0B3 334 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 PP2D1A8MPX8 630 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 BTBD19C9JJ37 291 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 POTEB2H3BUK9 544 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 GAS7O60861 476 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 EIF2AK2P19525 551 aaKnown RBP17.97■□□□□ 0.47
NUP54-214ENST00000514307 CCT6AP40227 531 aaKnown RBP17.97■□□□□ 0.47
NUP54-214ENST00000514307 AFMP43652 599 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 CT47A1Q5JQC4 288 aaPredicted RBP17.97■□□□□ 0.47
NUP54-214ENST00000514307 NT5DC1Q5TFE4 455 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 LRCH2Q5VUJ6 765 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 SLC30A10Q6XR72 485 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.97■□□□□ 0.47
NUP54-214ENST00000514307 CYP2W1Q8TAV3 490 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 TEKT3Q9BXF9 490 aa17.97■□□□□ 0.47
NUP54-214ENST00000514307 ZCCHC17Q9NP64 241 aaKnown RBP17.97■□□□□ 0.47
NUP54-214ENST00000514307 BMP2KQ9NSY1 1161 aaPredicted RBP17.97■□□□□ 0.47
NUP54-214ENST00000514307 TESPA1A2RU30 521 aaPredicted RBP17.96■□□□□ 0.47
NUP54-214ENST00000514307 IPO5O00410 1097 aaKnown RBP17.96■□□□□ 0.47
NUP54-214ENST00000514307 SARSP49591 514 aaKnown RBP17.96■□□□□ 0.47
NUP54-214ENST00000514307 ZNF165P49910 485 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 KCTD2Q14681 263 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 STXBP2Q15833 593 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 GNPTABQ3T906 1256 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 ANO6Q4KMQ2 910 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 HYIQ5T013 277 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 RGMBQ6NW40 437 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 PDXDC2PQ6P474 469 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 OTOP1Q7RTM1 612 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 MLKLQ8NB16 471 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 FAM200AQ8TCP9 573 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 BRI3BPQ8WY22 251 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 TCEAL9Q9UHQ7 104 aa17.96■□□□□ 0.47
NUP54-214ENST00000514307 STRNO43815 780 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 EIF3JO75822 258 aaKnown RBP17.95■□□□□ 0.46
NUP54-214ENST00000514307 CNMDO75829 334 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 PSMD10O75832 226 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 FCER1AP12319 257 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 ITGB5P18084 799 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 PLCG1P19174 1290 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 ERCC3P19447 782 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 MUTP22033 750 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 PPP2R5CQ13362 524 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 MTMR1Q13613 665 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 NCAPH2Q6IBW4 605 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 SPATA20Q8TB22 786 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 GPRASP2Q96D09 838 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 PARK7Q99497 189 aaKnown RBP17.95■□□□□ 0.46
NUP54-214ENST00000514307 MMTAG2Q9BU76 263 aaKnown RBP17.95■□□□□ 0.46
NUP54-214ENST00000514307 POLR3CQ9BUI4 534 aaPredicted RBP17.95■□□□□ 0.46
NUP54-214ENST00000514307 KCNH7Q9NS40 1196 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 KBTBD4Q9NVX7 518 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 DNM3Q9UQ16 869 aa17.95■□□□□ 0.46
NUP54-214ENST00000514307 PHIPQ8WWQ0 1821 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.94■□□□□ 0.46
NUP54-214ENST00000514307 LOC102724159A0A0B4J2E5 919 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 SMTNL1A8MU46 457 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 BECN2A8MW95 431 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 ARP10275 920 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 XRCC6P12956 609 aaKnown RBP eCLIP17.94■□□□□ 0.46
NUP54-214ENST00000514307 RPA1P27694 616 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 ERVK-9P63128 1117 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 ERVK-24P63145 666 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 TPM4P67936 248 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 MRPS9P82933 396 aaKnown RBP17.94■□□□□ 0.46
NUP54-214ENST00000514307 DPYDQ12882 1025 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 MKRN3Q13064 507 aaKnown RBP17.94■□□□□ 0.46
NUP54-214ENST00000514307 PWP2Q15269 919 aaKnown RBP17.94■□□□□ 0.46
NUP54-214ENST00000514307 EPHA7Q15375 998 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 Q3C1V9 767 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 POTEEQ6S8J3 1075 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 SAPCD2Q86UD0 394 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 RNF214Q8ND24 703 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 PLIN2Q99541 437 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 TUFT1Q9NNX1 390 aa17.94■□□□□ 0.46
NUP54-214ENST00000514307 POTEMA6NI47 508 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 GOLGA6L19H0YKK7 550 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 BIN1O00499 593 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 GRB10Q13322 594 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 NEK9Q8TD19 979 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 MMP19Q99542 508 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 C7orf25Q9BPX7 421 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 BPIFA3Q9BQP9 254 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 DNAJC25Q9H1X3 360 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 AGO4Q9HCK5 861 aaKnown RBP17.93■□□□□ 0.46
NUP54-214ENST00000514307 MORF4L1Q9UBU8 362 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 PASKQ96RG2 1323 aa17.93■□□□□ 0.46
NUP54-214ENST00000514307 FOXN1O15353 648 aa17.92■□□□□ 0.46
NUP54-214ENST00000514307 TOMM70O94826 608 aa17.92■□□□□ 0.46
NUP54-214ENST00000514307 CYP2C8P10632 490 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms