RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
NEDD9-214ENST00000513989 CYP3A7P24462 503 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.57
NEDD9-214ENST00000513989 RESTQ13127 1097 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 CEP55Q53EZ4 464 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 MYSM1Q5VVJ2 828 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 NIPA1Q7RTP0 329 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 MAML3Q96JK9 1138 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 PURBQ96QR8 312 aaKnown RBP11.52□□□□□ -0.57
NEDD9-214ENST00000513989 MXRA8Q9BRK3 442 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 NRBP1Q9UHY1 535 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 NR2E3Q9Y5X4 410 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 CDH23Q9H251 3354 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 SYNGAP1Q96PV0 1343 aa11.52□□□□□ -0.57
NEDD9-214ENST00000513989 BAZ2BQ9UIF8 2168 aaKnown RBP11.51□□□□□ -0.57
NEDD9-214ENST00000513989 ADAMTS3O15072 1205 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 IGHA2P01877 340 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 TGFB3P10600 412 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 CAPN2P17655 700 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 EDNRBP24530 442 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 CCND3P30281 292 aaPredicted RBP11.51□□□□□ -0.57
NEDD9-214ENST00000513989 CIITAP33076 1130 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 SETQ01105 290 aaPredicted RBP11.51□□□□□ -0.57
NEDD9-214ENST00000513989 PKP1Q13835 747 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 TTC38Q5R3I4 469 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 LHX8Q68G74 356 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 ARMCX2Q7L311 632 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 ANKLE1Q8NAG6 615 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 NPLOC4Q8TAT6 608 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 MORC4Q8TE76 937 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 ABHD16BQ9H3Z7 469 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 HMX1Q9NP08 348 aaPredicted RBP11.51□□□□□ -0.57
NEDD9-214ENST00000513989 VTA1Q9NP79 307 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 JADE2Q9NQC1 790 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 RTEL1Q9NZ71 1219 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 FLRT1Q9NZU1 646 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 DDX25Q9UHL0 483 aaKnown RBP11.51□□□□□ -0.57
NEDD9-214ENST00000513989 FRMPD4Q14CM0 1322 aa11.51□□□□□ -0.57
NEDD9-214ENST00000513989 EYSQ5T1H1 3165 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 MEIS1O00470 390 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 LAD1O00515 517 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 COL6A1P12109 1028 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 MCM7P33993 719 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 KRT85P78386 507 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 MTMR1Q13613 665 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
NEDD9-214ENST00000513989 ZNF174Q15697 407 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 CSPP1Q1MSJ5 1256 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 FOXD4L6Q3SYB3 417 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-214ENST00000513989 Q4G0T1 1027 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 PRR16Q569H4 304 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 EARS2Q5JPH6 523 aaKnown RBP11.5□□□□□ -0.57
NEDD9-214ENST00000513989 IQSEC1Q6DN90 963 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 FOXD4L3Q6VB84 417 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-214ENST00000513989 SEPT14Q6ZU15 432 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 PLA2G4DQ86XP0 818 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 GIMAP8Q8ND71 665 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-214ENST00000513989 GPRASP2Q96D09 838 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 FAM20AQ96MK3 541 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 GDF15Q99988 308 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 SCAND2PQ9GZW5 306 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-214ENST00000513989 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.5□□□□□ -0.57
NEDD9-214ENST00000513989 TCEAL9Q9UHQ7 104 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 ZDHHC9Q9Y397 364 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 MCM3APO60318 1980 aa11.5□□□□□ -0.57
NEDD9-214ENST00000513989 FIBPO43427 364 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 NEMFO60524 1076 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 NCLP19338 710 aaKnown RBP11.49□□□□□ -0.57
NEDD9-214ENST00000513989 TOB1P50616 345 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-214ENST00000513989 MRPS9P82933 396 aaKnown RBP11.49□□□□□ -0.57
NEDD9-214ENST00000513989 ACVR2BQ13705 512 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 TTLL4Q14679 1199 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 CALCRLQ16602 461 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 ANO1Q5XXA6 986 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 SLFN12Q8IYM2 578 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 C7orf61Q8IZ16 206 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 SCFD2Q8WU76 684 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 CRYGNQ8WXF5 182 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 LRCH3Q96II8 777 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 UBIAD1Q9Y5Z9 338 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 MRVI1Q9Y6F6 885 aa11.49□□□□□ -0.57
NEDD9-214ENST00000513989 A0A1W2PPC1 479 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 SPATA31C2B4DYI2 1134 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 FAM86B1E9PN63 330 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 TBX3O15119 743 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 SNAI1O95863 264 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-214ENST00000513989 FAM86B2P0C5J1 330 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 ITGB5P18084 799 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 CEBPZQ03701 1054 aaKnown RBP11.48□□□□□ -0.57
NEDD9-214ENST00000513989 NEDD9Q14511 834 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 STK38Q15208 465 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 IL31RAQ8NI17 732 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 MBOAT7Q96N66 472 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 INPP4AQ96PE3 977 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-214ENST00000513989 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 SDF4Q9BRK5 362 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 ZNF577Q9BSK1 485 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 RAB34Q9BZG1 259 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 WDR11Q9BZH6 1224 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms