RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 USP44Q9H0E7 712 aa7.98□□□□□ -1.13
HMGN1P17-201ENST00000513734 TNNQ9UQP3 1299 aa7.98□□□□□ -1.13
HMGN1P17-201ENST00000513734 COL1A1P02452 1464 aaPredicted RBP7.98□□□□□ -1.13
HMGN1P17-201ENST00000513734 CDK5RAP2Q96SN8 1893 aa7.98□□□□□ -1.13
HMGN1P17-201ENST00000513734 UBE2Q2LH0YL09 131 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 WISP1O95388 367 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 FGRP09769 529 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 IL1R1P14778 569 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 GTF2F1P35269 517 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 MAP2K2P36507 400 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 KIF23Q02241 960 aaPredicted RBP7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 RPL6Q02878 288 aaKnown RBP7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 CCDC57Q2TAC2 916 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 RABL6Q3YEC7 729 aaPredicted RBP7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 PRRT3Q5FWE3 981 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 TAF7LQ5H9L4 462 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 C15orf52Q6ZUT6 534 aaKnown RBP7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 RASAL3Q86YV0 1011 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 SLITRK4Q8IW52 837 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 BEND7Q8N7W2 519 aaPredicted RBP7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 C2orf69Q8N8R5 385 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 DHX38Q92620 1227 aaKnown RBP7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 CNNM1Q9NRU3 951 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 RAD18Q9NS91 495 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 SMC4Q9NTJ3 1288 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 NOP53Q9NZM5 478 aaKnown RBP7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 RIPOR2Q9Y4F9 1068 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 PTPRCP08575 1304 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 CNTNAP5Q8WYK1 1306 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 PITPNM2Q9BZ72 1349 aa7.97□□□□□ -1.13
HMGN1P17-201ENST00000513734 DOCK2Q92608 1830 aa7.96□□□□□ -1.13
HMGN1P17-201ENST00000513734 CLRN2A0PK11 232 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 ELNP15502 786 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 RFX5P48382 616 aaPredicted RBP7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 SOX9P48436 509 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 PRKG1Q13976 671 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 COL9A2Q14055 689 aaPredicted RBP7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 INPP5AQ14642 412 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 ACAD11Q709F0 780 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 REC114Q7Z4M0 266 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 VGLL2Q8N8G2 317 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 UBXN4Q92575 508 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 PLPPR2Q96GM1 343 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 FAM84BQ96KN1 310 aaPredicted RBP7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 RUSC1Q9BVN2 902 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 BRMS1Q9HCU9 246 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 MYO3BQ8WXR4 1341 aa7.96□□□□□ -1.14
HMGN1P17-201ENST00000513734 MKI67P46013 3256 aaKnown RBP7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 DCDC2CA8MYV0 355 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 SSBP05455 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 SLFN14P0C7P3 912 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 SELPP16109 830 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 ZNF165P49910 485 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 NOGQ13253 232 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 CFAP100Q494V2 611 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 WIPI1Q5MNZ9 446 aaPredicted RBP7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 EXOSC6Q5RKV6 272 aaKnown RBP7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 LRFN4Q6PJG9 635 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 IGF2-ASQ6U949 168 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 ZNF804AQ7Z570 1209 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 TDRD7Q8NHU6 1098 aaKnown RBP7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 CPLX3Q8WVH0 158 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 ELMO3Q96BJ8 720 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 WDR18Q9BV38 432 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 NOB1Q9ULX3 412 aaKnown RBP7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 PPT2Q9UMR5 302 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 CSADQ9Y600 493 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 PTPRFP10586 1907 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 BRCA2P51587 3418 aa7.95□□□□□ -1.14
HMGN1P17-201ENST00000513734 ATAD5Q96QE3 1844 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 PDE4DIPQ5VU43 2346 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 CCER2I3L3R5 266 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 UBE4AQ14139 1066 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 GRIK4Q16099 956 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 ALDH1L2Q3SY69 923 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 SHISA2Q6UWI4 295 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 GK5Q6ZS86 529 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 KIAA1211Q6ZU35 1233 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 HDXQ7Z353 690 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 ABHD8Q96I13 439 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 CLMNQ96JQ2 1002 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 PRMT6Q96LA8 375 aaPredicted RBP7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 RNF186Q9NXI6 227 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 SNCAIPQ9Y6H5 919 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 FAM205AQ6ZU69 1335 aa7.94□□□□□ -1.14
HMGN1P17-201ENST00000513734 GFRA2O00451 464 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 FGFR2P21802 821 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 HIBADHP31937 336 aaKnown RBP7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 RARSP54136 660 aaKnown RBP7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 CHAF1AQ13111 956 aaPredicted RBP7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 DLGAP5Q15398 846 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 ZC3H12AQ5D1E8 599 aaKnown RBP7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 METTL24Q5JXM2 366 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 MFSD14BQ5SR56 506 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 FBXW10Q5XX13 1052 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 CCDC81Q6ZN84 652 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 ATG9AQ7Z3C6 839 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 C12orf40Q86WS4 652 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 FERD3LQ96RJ6 166 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 DNAJC2Q99543 621 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms