RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SAMD1Q6SPF0 538 aaPredicted RBP9.37□□□□□ -0.91
RNF4-220ENST00000513578 B3GNT9Q6UX72 402 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 CATSPERGQ6ZRH7 1159 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 APTXQ7Z2E3 356 aaKnown RBP9.37□□□□□ -0.91
RNF4-220ENST00000513578 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 VSTM4Q8IW00 320 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 LRRC8AQ8IWT6 810 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 SPC24Q8NBT2 197 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 CCDC150Q8NCX0 1101 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 KIAA1524Q8TCG1 905 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 TBC1D5Q92609 795 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 ZKSCAN4Q969J2 545 aaPredicted RBP9.37□□□□□ -0.91
RNF4-220ENST00000513578 DCPSQ96C86 337 aaKnown RBP9.37□□□□□ -0.91
RNF4-220ENST00000513578 AGBL1Q96MI9 1066 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 TANGO6Q9C0B7 1094 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 KCNF1Q9H3M0 494 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 KCND1Q9NSA2 647 aa9.37□□□□□ -0.91
RNF4-220ENST00000513578 LIMA1Q9UHB6 759 aaKnown RBP9.37□□□□□ -0.91
RNF4-220ENST00000513578 BICDL2A1A5D9 508 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 MYMKA6NI61 221 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 PSMA7O14818 248 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 PSMD10O75832 226 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 FLOT1O75955 427 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 SERPINC1P01008 464 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 CCNE1P24864 410 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 CCT6AP40227 531 aaKnown RBP9.36□□□□□ -0.91
RNF4-220ENST00000513578 KCNJ6P48051 423 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 PDE4DQ08499 809 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 MCM6Q14566 821 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 COG2Q14746 738 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 GPR162Q16538 588 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 ECM1Q16610 540 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 PCNX4Q63HM2 1172 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 DPY19L2Q6NUT2 758 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 OTOP1Q7RTM1 612 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 FCHSD1Q86WN1 690 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 SULF1Q8IWU6 871 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 NEK9Q8TD19 979 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 NELFBQ8WX92 580 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 DNAJC19Q96DA6 116 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 PLIN2Q99541 437 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 RIT2Q99578 217 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 MXRA8Q9BRK3 442 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 WDR11Q9BZH6 1224 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 THAP9Q9H5L6 903 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 TUFT1Q9NNX1 390 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 SAMSN1Q9NSI8 373 aaKnown RBP9.36□□□□□ -0.91
RNF4-220ENST00000513578 BMP2KQ9NSY1 1161 aaPredicted RBP9.36□□□□□ -0.91
RNF4-220ENST00000513578 SPTLC3Q9NUV7 552 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 EXOC1Q9NV70 894 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 HOXC10Q9NYD6 342 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 TMOD4Q9NZQ9 345 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 NRBP1Q9UHY1 535 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 CTNND2Q9UQB3 1225 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 ZHX2Q9Y6X8 837 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 KIAA1217Q5T5P2 1943 aa9.36□□□□□ -0.91
RNF4-220ENST00000513578 LCTP09848 1927 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 GOLGB1Q14789 3259 aaKnown RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 FRMD3A2A2Y4 597 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 UNCXA6NJT0 531 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 PPP1R12BO60237 982 aaPredicted RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 MED24O75448 989 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 SPATA31C1P0DKV0 1188 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 TAL1P17542 331 aaPredicted RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 EEF1GP26641 437 aaKnown RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 PBX1P40424 430 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 ASIC1P78348 528 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 TBX2Q13207 712 aaPredicted RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 EPHA7Q15375 998 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 CENPPQ6IPU0 288 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 KCNK18Q7Z418 384 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 CATSPER3Q86XQ3 398 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 GUF1Q8N442 669 aaKnown RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 SYT2Q8N9I0 419 aaPredicted RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 SYTL5Q8TDW5 730 aaPredicted RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 CACTINQ8WUQ7 758 aaKnown RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 P2RX5Q93086 422 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 NAP1L5Q96NT1 182 aaPredicted RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 HSD17B14Q9BPX1 270 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 RAVER2Q9HCJ3 691 aaKnown RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 ADD3Q9UEY8 706 aaKnown RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 GDAQ9Y2T3 454 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 CTDP1Q9Y5B0 961 aaPredicted RBP9.35□□□□□ -0.91
RNF4-220ENST00000513578 UBIAD1Q9Y5Z9 338 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 SNCAIPQ9Y6H5 919 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 MYH11P35749 1972 aa9.35□□□□□ -0.91
RNF4-220ENST00000513578 ITIH6Q6UXX5 1313 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 NFIBO00712 420 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 CXCL11O14625 94 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 GRIN3BO60391 1043 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 OFD1O75665 1012 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 EYA4O95677 639 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 PLA2G4BP0C869 781 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 ALAS1P13196 640 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 IREB2P48200 963 aaKnown RBP9.34□□□□□ -0.91
RNF4-220ENST00000513578 HMGCS2P54868 508 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 SLC12A3P55017 1021 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms