RNA–Protein interactions for RNA: ENST00000512805.5

RACK1-227, Transcript of receptor for activated C kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACK1, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-227ENST00000512805 GPHNQ9NQX3 736 aaPredicted RBP12.35□□□□□ -0.43
RACK1-227ENST00000512805 VWA5AO00534 786 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 ZNF213O14771 459 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 PRDM1O75626 825 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
RACK1-227ENST00000512805 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
RACK1-227ENST00000512805 FAM117BQ6P1L5 589 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 FBXO11Q86XK2 927 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 TMEM192Q8IY95 271 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 AFAP1L1Q8TED9 768 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 STAG1Q8WVM7 1258 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 RUBCNQ92622 972 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 RPGRIP1Q96KN7 1286 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 JAKMIP1Q96N16 626 aaKnown RBP12.34□□□□□ -0.43
RACK1-227ENST00000512805 TTC14Q96N46 770 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 NACAP1Q9BZK3 213 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 LMAN2LQ9H0V9 348 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 CLEC1BQ9P126 229 aa12.34□□□□□ -0.43
RACK1-227ENST00000512805 ARPP21Q9UBL0 812 aaPredicted RBP12.34□□□□□ -0.43
RACK1-227ENST00000512805 SCN10AQ9Y5Y9 1956 aa12.33□□□□□ -0.44
RACK1-227ENST00000512805 MICAL3Q7RTP6 2002 aa12.33□□□□□ -0.44
RACK1-227ENST00000512805 PARNO95453 639 aaKnown RBP12.33□□□□□ -0.44
RACK1-227ENST00000512805 SMPD1P17405 629 aa12.33□□□□□ -0.44
RACK1-227ENST00000512805 SHMT1P34896 483 aa12.33□□□□□ -0.44
RACK1-227ENST00000512805 GTF2F1P35269 517 aaKnown RBP eCLIP12.33□□□□□ -0.443e-6■■■□□ 18.1
RACK1-227ENST00000512805 ANGPT1Q15389 498 aa12.33□□□□□ -0.44
RACK1-227ENST00000512805 C16orf86Q6ZW13 317 aa12.33□□□□□ -0.44
RACK1-227ENST00000512805 NOL8Q76FK4 1167 aaKnown RBP12.33□□□□□ -0.44
RACK1-227ENST00000512805 CCDC144CPQ8IYA2 1237 aa12.33□□□□□ -0.44
RACK1-227ENST00000512805 UBALD2Q8IYN6 164 aa12.33□□□□□ -0.44
RACK1-227ENST00000512805 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
RACK1-227ENST00000512805 UPF2Q9HAU5 1272 aaKnown RBP12.33□□□□□ -0.44
RACK1-227ENST00000512805 B4E1Z4 1266 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 WDR46O15213 610 aaKnown RBP12.32□□□□□ -0.44
RACK1-227ENST00000512805 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
RACK1-227ENST00000512805 MYH1P12882 1939 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 ATF7P17544 494 aaPredicted RBP12.32□□□□□ -0.44
RACK1-227ENST00000512805 PTGS1P23219 599 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 IKBKEQ14164 716 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 CHST3Q7LGC8 479 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 NLRC5Q86WI3 1866 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 DCLK2Q8N568 766 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 GCN1Q92616 2671 aaKnown RBP12.32□□□□□ -0.44
RACK1-227ENST00000512805 TM6SF1Q9BZW5 370 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 SENP2Q9HC62 589 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 USP15Q9Y4E8 981 aaPredicted RBP12.32□□□□□ -0.44
RACK1-227ENST00000512805 MYO10Q9HD67 2058 aa12.32□□□□□ -0.44
RACK1-227ENST00000512805 RALGAPA2Q2PPJ7 1873 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 C5orf67F2Z3F1 127 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 EIF5BO60841 1220 aaKnown RBP12.31□□□□□ -0.44
RACK1-227ENST00000512805 NBNO60934 754 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 RASA1P20936 1047 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 CDK8P49336 464 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 NDUFV1P49821 464 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 PURAQ00577 322 aaKnown RBP12.31□□□□□ -0.44
RACK1-227ENST00000512805 PTPN11Q06124 597 aaPredicted RBP12.31□□□□□ -0.44
RACK1-227ENST00000512805 RNF20Q5VTR2 975 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 SIAH1Q8IUQ4 282 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 CCDC105Q8IYK2 499 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 CYP2W1Q8TAV3 490 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 CAGE1Q8TC20 777 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 LARP6Q9BRS8 491 aaKnown RBP12.31□□□□□ -0.44
RACK1-227ENST00000512805 LRRC2Q9BYS8 371 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 POLR3EQ9NVU0 708 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 ZSWIM5Q9P217 1185 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 TMX2Q9Y320 296 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 RIPK3Q9Y572 518 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 ZZEF1O43149 2961 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 SPEGQ15772 3267 aa12.31□□□□□ -0.44
RACK1-227ENST00000512805 BAZ2AQ9UIF9 1905 aaKnown RBP12.3□□□□□ -0.44
RACK1-227ENST00000512805 ORC4O43929 436 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 NMT2O60551 498 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 CASTP20810 708 aaKnown RBP12.3□□□□□ -0.44
RACK1-227ENST00000512805 RPS6KB1P23443 525 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 MCCP23508 829 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 RBL2Q08999 1139 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 TOB2Q14106 344 aaPredicted RBP12.3□□□□□ -0.44
RACK1-227ENST00000512805 IQSEC1Q6DN90 963 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 RUFY3Q7L099 469 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 SPICE1Q8N0Z3 855 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 SUSD6Q92537 303 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 TEX13BQ9BXU2 312 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 IGFLR1Q9H665 355 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 VCPKMTQ9H867 229 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 IL17RBQ9NRM6 502 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 FBXO28Q9NVF7 368 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 PPP1R9AQ9ULJ8 1098 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 NAV1Q8NEY1 1877 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
RACK1-227ENST00000512805 RB1P06400 928 aa12.29□□□□□ -0.44
RACK1-227ENST00000512805 SELPP16109 830 aa12.29□□□□□ -0.44
RACK1-227ENST00000512805 NEK4P51957 841 aa12.29□□□□□ -0.44
RACK1-227ENST00000512805 RABEP1Q15276 862 aa12.29□□□□□ -0.44
RACK1-227ENST00000512805 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.29□□□□□ -0.44
RACK1-227ENST00000512805 MFSD6Q6ZSS7 791 aa12.29□□□□□ -0.44
RACK1-227ENST00000512805 HINFPQ9BQA5 517 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms