RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 GBP7Q8N8V2 638 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-210ENST00000512756 DHX36Q9H2U1 1008 aaKnown RBP13.55□□□□□ -0.24
COL11A1-210ENST00000512756 RRP15Q9Y3B9 282 aaKnown RBP13.55□□□□□ -0.24
COL11A1-210ENST00000512756 ANKARQ7Z5J8 1434 aa13.55□□□□□ -0.24
COL11A1-210ENST00000512756 EIF3BP55884 814 aaKnown RBP13.54□□□□□ -0.24
COL11A1-210ENST00000512756 TCP11X2Q5H9J9 407 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 PCDHA13Q9Y5I0 950 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 FAM170AA1A519 330 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 XPOTO43592 962 aaKnown RBP13.54□□□□□ -0.24
COL11A1-210ENST00000512756 APBA3O96018 575 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 CLCN6P51797 869 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 IFT88Q13099 833 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 RESP18Q5W5W9 173 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 NXNQ6DKJ4 435 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
COL11A1-210ENST00000512756 SLC7A3Q8WY07 619 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 PAGR1Q9BTK6 254 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 ANKFY1Q9P2R3 1169 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 PTPN22Q9Y2R2 807 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 WDR17Q8IZU2 1322 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 POC1B-GALNT4F8VUJ3 575 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 PLTPP55058 493 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 ALCAMQ13740 583 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 EXOC8Q8IYI6 725 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 FAM133AQ8N9E0 248 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 MAD1L1Q9Y6D9 718 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 ERBB3P21860 1342 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 A0A087WUV0 522 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-210ENST00000512756 H7C1W4 665 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 MFAP3LO75121 409 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 PLCG1P19174 1290 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 CDHR1Q96JP9 859 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 SEC31BQ9NQW1 1179 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 ATP8A1Q9Y2Q0 1164 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 WDR19Q8NEZ3 1342 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 SART1O43290 800 aaKnown RBP13.54□□□□□ -0.24
COL11A1-210ENST00000512756 BAG2O95816 211 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 EMBQ6PCB8 327 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 MB21D1Q8N884 522 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 GCNT4Q9P109 453 aa13.54□□□□□ -0.24
COL11A1-210ENST00000512756 STK36Q9NRP7 1315 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 MOCS3O95396 460 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
COL11A1-210ENST00000512756 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 SCYL1Q96KG9 808 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 A0A087WWV3 80 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 PRAMEF22A3QJZ6 481 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 SGK1O00141 431 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 BMP3P12645 472 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 IFNAR2P48551 515 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 C2orf54Q08AI8 447 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 HINFPQ9BQA5 517 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 KMT5AQ9NQR1 393 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 DISC1Q9NRI5 854 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 ANAPC5Q9UJX4 755 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 PPEF1O14829 653 aaPredicted RBP13.53□□□□□ -0.24
COL11A1-210ENST00000512756 PTPREP23469 700 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 KRT31Q15323 416 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 PI16Q6UXB8 463 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 NME8Q8N427 588 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 IPO11Q9UI26 975 aaKnown RBP13.53□□□□□ -0.24
COL11A1-210ENST00000512756 ZMYND10O75800 440 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 PDE1BQ01064 536 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 CUL4BQ13620 913 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 CASP8Q14790 479 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 MUM1L1Q5H9M0 696 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 TTBK2Q6IQ55 1244 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 RFX6Q8HWS3 928 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 HVCN1Q96D96 273 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 BPIFA3Q9BQP9 254 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 MTA3Q9BTC8 594 aa13.53□□□□□ -0.24
COL11A1-210ENST00000512756 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.53□□□□□ -0.24
COL11A1-210ENST00000512756 RFX7Q2KHR2 1363 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 FTCDO95954 541 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 NNTQ13423 1086 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 CUL1Q13616 776 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 PRPSAP1Q14558 356 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 CC2D2BQ6DHV5 1058 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 ANKRD36BP1Q96IX9 119 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 CCDC68Q9H2F9 335 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 TLR3O15455 904 aaKnown RBP13.52□□□□□ -0.24
COL11A1-210ENST00000512756 RCAN1P53805 252 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 USP14P54578 494 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 GLE1Q53GS7 698 aaKnown RBP13.52□□□□□ -0.24
COL11A1-210ENST00000512756 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 TTC19Q6DKK2 380 aaPredicted RBP13.52□□□□□ -0.24
COL11A1-210ENST00000512756 KCTD1Q719H9 257 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 NEK9Q8TD19 979 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 STRBPQ96SI9 672 aaKnown RBP13.52□□□□□ -0.24
COL11A1-210ENST00000512756 TUBB6Q9BUF5 446 aa13.52□□□□□ -0.24
COL11A1-210ENST00000512756 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.24
COL11A1-210ENST00000512756 NCAPD2Q15021 1401 aa13.52□□□□□ -0.25
COL11A1-210ENST00000512756 PALM3A6NDB9 673 aaPredicted RBP13.52□□□□□ -0.25
COL11A1-210ENST00000512756 CCDC188H7C350 402 aa13.52□□□□□ -0.25
COL11A1-210ENST00000512756 CTNND1O60716 968 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms