RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ECM1Q16610 540 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 CCDC96Q2M329 555 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 TEX2Q8IWB9 1127 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 SLFN12Q8IYM2 578 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 CRYGNQ8WXF5 182 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 BAP1Q92560 729 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 SECISBP2LQ93073 1101 aaKnown RBP10.25□□□□□ -0.77
CPNE4-210ENST00000512332 RHOXF2Q9BQY4 288 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 PANK4Q9NVE7 773 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 PSD3Q9NYI0 1048 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 PI4KBQ9UBF8 816 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 PCDHA2Q9Y5H9 948 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 STK24Q9Y6E0 443 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 PITPNM2Q9BZ72 1349 aa10.25□□□□□ -0.77
CPNE4-210ENST00000512332 ANKRD31Q8N7Z5 1873 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 FRMD3A2A2Y4 597 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 ENC1O14682 589 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 PJA2O43164 708 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 MARCH6O60337 910 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 TFRCP02786 760 aaKnown RBP10.24□□□□□ -0.77
CPNE4-210ENST00000512332 SLC16A2P36021 539 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 CRKP46108 304 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 QRICH1Q2TAL8 776 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 FAM26FQ5R3K3 315 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 IQCEQ6IPM2 695 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 TATDN1Q6P1N9 297 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 ZNF572Q7Z3I7 529 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-210ENST00000512332 C2CD5Q86YS7 1000 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 CCDC65Q8IXS2 484 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 ZC3H3Q8IXZ2 948 aaKnown RBP10.24□□□□□ -0.77
CPNE4-210ENST00000512332 IFIH1Q9BYX4 1025 aaKnown RBP10.24□□□□□ -0.77
CPNE4-210ENST00000512332 TMX4Q9H1E5 349 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-210ENST00000512332 VIPAS39Q9H9C1 493 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 PCDHA13Q9Y5I0 950 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 COL4A3BPQ9Y5P4 624 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 MYH7BA7E2Y1 1941 aa10.24□□□□□ -0.77
CPNE4-210ENST00000512332 RBAK-RBAKDNI3L0D1 243 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 MPHOSPH10O00566 681 aaKnown RBP10.23□□□□□ -0.77
CPNE4-210ENST00000512332 TACC1O75410 805 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 SCNN1DP51172 638 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 KIF11P52732 1056 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 CYP27A1Q02318 531 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 NFIAQ12857 509 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 ASTE1Q2TB18 679 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-210ENST00000512332 PPP4R3CPQ6ZMV5 832 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 KCTD1Q719H9 257 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 KCTD17Q8N5Z5 321 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 RUBCNQ92622 972 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 EXOC4Q96A65 974 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 MASTLQ96GX5 879 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 MMS19Q96T76 1030 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 SH2D4AQ9H788 454 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 DNAJC18Q9H819 358 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 MMRN2Q9H8L6 949 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 FAM207AQ9NSI2 230 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-210ENST00000512332 HDAC6Q9UBN7 1215 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 PCDHA1Q9Y5I3 950 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 MYH4Q9Y623 1939 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 EPHB6O15197 1021 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 POLR3GO15318 223 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-210ENST00000512332 FOSP01100 380 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-210ENST00000512332 PLA2G4BP0C869 781 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 EEF2P13639 858 aaKnown RBP10.23□□□□□ -0.77
CPNE4-210ENST00000512332 SLC1A4P43007 532 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 MMP14P50281 582 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 KCNMA1Q12791 1236 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 CASP8Q14790 479 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 DOK7Q18PE1 504 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 EDRF1Q3B7T1 1238 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 MAP9Q49MG5 647 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 CERKLQ49MI3 558 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-210ENST00000512332 STRIP1Q5VSL9 837 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 PDXDC1Q6P996 788 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 RNF10Q8N5U6 811 aaKnown RBP10.23□□□□□ -0.77
CPNE4-210ENST00000512332 NEK11Q8NG66 645 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 ACBD3Q9H3P7 528 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 CEP72Q9P209 647 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 FAM184BQ9ULE4 1060 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 SYNPO2Q9UMS6 1093 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 SNX12Q9UMY4 172 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 TFR2Q9UP52 801 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 DUSP10Q9Y6W6 482 aa10.23□□□□□ -0.77
CPNE4-210ENST00000512332 LRRC53A6NM62 1247 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 G3V3G9 751 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 MEIS2O14770 477 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 AKR1B10O60218 316 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 EIF4A3P38919 411 aaKnown RBP10.22□□□□□ -0.77
CPNE4-210ENST00000512332 Q4G0T1 1027 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 DCAF8Q5TAQ9 597 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 HAUS3Q68CZ6 603 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 SLFN13Q68D06 897 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 RRAGAQ7L523 313 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 TRIM59Q8IWR1 403 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 GMCL1P1Q8NEA9 526 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 GMCL1Q96IK5 515 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 MXD3Q9BW11 206 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 ANO3Q9BYT9 981 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 ZCCHC17Q9NP64 241 aaKnown RBP10.22□□□□□ -0.77
CPNE4-210ENST00000512332 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L15C9J2P7 530 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms