RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 HSDL1Q3SXM5 330 aa18.95■□□□□ 0.62
DDX41-213ENST00000512027 CELF3Q5SZQ8 465 aaKnown RBP18.95■□□□□ 0.62
DDX41-213ENST00000512027 MYSM1Q5VVJ2 828 aa18.95■□□□□ 0.62
DDX41-213ENST00000512027 PCNX4Q63HM2 1172 aa18.95■□□□□ 0.62
DDX41-213ENST00000512027 PHKBQ93100 1093 aa18.95■□□□□ 0.62
DDX41-213ENST00000512027 EMID1Q96A84 441 aaPredicted RBP18.95■□□□□ 0.62
DDX41-213ENST00000512027 TELO2Q9Y4R8 837 aa18.95■□□□□ 0.62
DDX41-213ENST00000512027 CCL23P55773 120 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 LAMC2Q13753 1193 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 MFSD5Q6N075 450 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 FBXL16Q8N461 479 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 SPATA33Q96N06 139 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 NOC4LQ9BVI4 516 aaKnown RBP18.94■□□□□ 0.62
DDX41-213ENST00000512027 HIPK3Q9H422 1215 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 TMEM260Q9NX78 707 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 PCDHA6Q9UN73 950 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 PCDHA8Q9Y5H6 950 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 CYP46A1Q9Y6A2 500 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 TANC1Q9C0D5 1861 aa18.94■□□□□ 0.62
DDX41-213ENST00000512027 ADAMTS3O15072 1205 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 KPNA6O60684 536 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 ACRP10323 421 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 PDIA3P30101 505 aaKnown RBP18.93■□□□□ 0.62
DDX41-213ENST00000512027 DGKDQ16760 1214 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 GNPTABQ3T906 1256 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 KCNV1Q6PIU1 500 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 PPTC7Q8NI37 304 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 ALG1Q9BT22 464 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 WNT8AQ9H1J5 351 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 MLXIPQ9HAP2 919 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 BARHL2Q9NY43 387 aa18.93■□□□□ 0.62
DDX41-213ENST00000512027 TRIP12Q14669 1992 aaPredicted RBP18.92■□□□□ 0.62
DDX41-213ENST00000512027 SMCO2A6NFE2 343 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 SPDYE3A6NKU9 549 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 SPATA31C2B4DYI2 1134 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 ICAM3P32942 547 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 ADCY7P51828 1080 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 SP4Q02446 784 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 NTRK3Q16288 839 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 PKN1Q16512 942 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 PFKFB3Q16875 520 aaPredicted RBP18.92■□□□□ 0.62
DDX41-213ENST00000512027 PPP1R18Q6NYC8 613 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 Q7L0L9 218 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 C16orf59Q7L2K0 433 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 CYFIP1Q7L576 1253 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 SCLYQ96I15 445 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.92■□□□□ 0.626e-9■□□□□ 11
DDX41-213ENST00000512027 TM6SF1Q9BZW5 370 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 RIC8AQ9NPQ8 531 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 PKD2L1Q9P0L9 805 aa18.92■□□□□ 0.62
DDX41-213ENST00000512027 CCDC196A0A1B0GTZ2 297 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 FIBPO43427 364 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 STAM2O75886 525 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 SEC24BO95487 1268 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 TGFB3P10600 412 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 SCG2P13521 617 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 ITGB5P18084 799 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 PSEN2P49810 448 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 STK3Q13188 491 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 NFRKBQ6P4R8 1299 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 RNPC3Q96LT9 517 aaKnown RBP18.91■□□□□ 0.62
DDX41-213ENST00000512027 SEZ6LQ9BYH1 1024 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 PDRG1Q9NUG6 133 aa18.91■□□□□ 0.62
DDX41-213ENST00000512027 hCG_1984214I3L0E3 225 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 DTNBO60941 627 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 ATP9AO75110 1047 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 F2P00734 622 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 HOXD8P13378 290 aaPredicted RBP18.9■□□□□ 0.62
DDX41-213ENST00000512027 EVCP57679 992 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 MFSD10Q14728 455 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 GDF6Q6KF10 455 aaPredicted RBP18.9■□□□□ 0.62
DDX41-213ENST00000512027 TMEM199Q8N511 208 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 ZNF713Q8N859 430 aaPredicted RBP18.9■□□□□ 0.62
DDX41-213ENST00000512027 CTAGE1Q96RT6 745 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 SLC26A6Q9BXS9 759 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 ANO3Q9BYT9 981 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 HDAC6Q9UBN7 1215 aa18.9■□□□□ 0.62
DDX41-213ENST00000512027 PRPF3O43395 683 aaKnown RBP18.89■□□□□ 0.61
DDX41-213ENST00000512027 PPIGQ13427 754 aaKnown RBP eCLIP18.89■□□□□ 0.613e-9■■■■□ 24.9
DDX41-213ENST00000512027 KIAA0753Q2KHM9 967 aa18.89■□□□□ 0.61
DDX41-213ENST00000512027 TMEM240Q5SV17 173 aa18.89■□□□□ 0.61
DDX41-213ENST00000512027 JAKMIP3Q5VZ66 844 aa18.89■□□□□ 0.61
DDX41-213ENST00000512027 XRRA1Q6P2D8 792 aa18.89■□□□□ 0.61
DDX41-213ENST00000512027 NLRX1Q86UT6 975 aa18.89■□□□□ 0.61
DDX41-213ENST00000512027 UBIAD1Q9Y5Z9 338 aa18.89■□□□□ 0.61
DDX41-213ENST00000512027 HAS3O00219 553 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 LGALS2P05162 132 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 SUPT20HL2P0C7V6 817 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 IFNAR1P17181 557 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 CLK2P49760 499 aaKnown RBP18.88■□□□□ 0.61
DDX41-213ENST00000512027 ZNF200P98182 395 aaPredicted RBP18.88■□□□□ 0.61
DDX41-213ENST00000512027 PTPN11Q06124 597 aaPredicted RBP18.88■□□□□ 0.61
DDX41-213ENST00000512027 NEDD9Q14511 834 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 HIC1Q14526 733 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 PTGISQ16647 500 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 METTL7BQ6UX53 244 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 ZNF365Q70YC5 407 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 TRIM50Q86XT4 487 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 CYP2W1Q8TAV3 490 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 GPRASP2Q96D09 838 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms