RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PGBD1Q96JS3 809 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 SPATA33Q96N06 139 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 NOC4LQ9BVI4 516 aaKnown RBP15.28■□□□□ 0.04
RNF4-215ENST00000511843 NCOA5Q9HCD5 579 aaKnown RBP15.28■□□□□ 0.04
RNF4-215ENST00000511843 TELO2Q9Y4R8 837 aa15.28■□□□□ 0.04
RNF4-215ENST00000511843 KPNA6O60684 536 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 CCT2P78371 535 aaKnown RBP15.27■□□□□ 0.04
RNF4-215ENST00000511843 LAMC2Q13753 1193 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 DGKDQ16760 1214 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 MYSM1Q5VVJ2 828 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 PCNX4Q63HM2 1172 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 RUFY3Q7L099 469 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 C16orf59Q7L2K0 433 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 PPTC7Q8NI37 304 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 PHKBQ93100 1093 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 INPP4AQ96PE3 977 aaPredicted RBP15.27■□□□□ 0.04
RNF4-215ENST00000511843 ALG1Q9BT22 464 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 AGXT2Q9BYV1 514 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 WNT8AQ9H1J5 351 aa15.27■□□□□ 0.04
RNF4-215ENST00000511843 KAT6AQ92794 2004 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 ADAMTS3O15072 1205 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 SP4Q02446 784 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 KCNV1Q6PIU1 500 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 EMID1Q96A84 441 aaPredicted RBP15.26■□□□□ 0.03
RNF4-215ENST00000511843 SCLYQ96I15 445 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 RNPC3Q96LT9 517 aaKnown RBP15.26■□□□□ 0.03
RNF4-215ENST00000511843 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.26■□□□□ 0.032e-7■■■□□ 16.9
RNF4-215ENST00000511843 ZSWIM6Q9HCJ5 1215 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 TMEM260Q9NX78 707 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 PKD2L1Q9P0L9 805 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 PCDHA6Q9UN73 950 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 PCDHA8Q9Y5H6 950 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 TET1Q8NFU7 2136 aa15.26■□□□□ 0.03
RNF4-215ENST00000511843 NID2Q14112 1375 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 SPDYE3A6NKU9 549 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 SPATA31C2B4DYI2 1134 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 FIBPO43427 364 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 PDIA3P30101 505 aaKnown RBP15.25■□□□□ 0.03
RNF4-215ENST00000511843 PSEN2P49810 448 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 ADCY7P51828 1080 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 RCAN1P53805 252 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 PPIGQ13427 754 aaKnown RBP eCLIP15.25■□□□□ 0.034e-10■■□□□ 12.4
RNF4-215ENST00000511843 GNPTABQ3T906 1256 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 GDF6Q6KF10 455 aaPredicted RBP15.25■□□□□ 0.03
RNF4-215ENST00000511843 NFRKBQ6P4R8 1299 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 CYFIP1Q7L576 1253 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 TMEM199Q8N511 208 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 MLXIPQ9HAP2 919 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 BARHL2Q9NY43 387 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 CYP46A1Q9Y6A2 500 aa15.25■□□□□ 0.03
RNF4-215ENST00000511843 SMCO2A6NFE2 343 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 EPB41L2O43491 1005 aaKnown RBP15.24■□□□□ 0.03
RNF4-215ENST00000511843 DTNBO60941 627 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 F2P00734 622 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 TGFB3P10600 412 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 SCG2P13521 617 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 ITGB5P18084 799 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 ICAM3P32942 547 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 MFSD10Q14728 455 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 PKN1Q16512 942 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 PFKFB3Q16875 520 aaPredicted RBP15.24■□□□□ 0.03
RNF4-215ENST00000511843 KIAA0753Q2KHM9 967 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 TMEM240Q5SV17 173 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 ZNF365Q70YC5 407 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 FBXL16Q8N461 479 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 CTAGE1Q96RT6 745 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 SEZ6LQ9BYH1 1024 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 RIC8AQ9NPQ8 531 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 HDAC6Q9UBN7 1215 aa15.24■□□□□ 0.03
RNF4-215ENST00000511843 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 HAS3O00219 553 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 ATP9AO75110 1047 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 STAM2O75886 525 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 SUPT20HL2P0C7V6 817 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 HOXD8P13378 290 aaPredicted RBP15.23■□□□□ 0.03
RNF4-215ENST00000511843 ZNF200P98182 395 aaPredicted RBP15.23■□□□□ 0.03
RNF4-215ENST00000511843 STK3Q13188 491 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 HIC1Q14526 733 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 NTRK3Q16288 839 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 PTGISQ16647 500 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 FAM109BQ6ICB4 259 aaPredicted RBP15.23■□□□□ 0.03
RNF4-215ENST00000511843 PPP1R18Q6NYC8 613 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 NLRX1Q86UT6 975 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 TRIM50Q86XT4 487 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 DEFB123Q8N688 67 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 VWCEQ96DN2 955 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 FAM161BQ96MY7 647 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 C16orf70Q9BSU1 422 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 ANO3Q9BYT9 981 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 IL23AQ9NPF7 189 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 NOD1Q9Y239 953 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 PTPRSQ13332 1948 aa15.23■□□□□ 0.03
RNF4-215ENST00000511843 WDR81Q562E7 1941 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 NOP56O00567 594 aaKnown RBP15.22■□□□□ 0.03
RNF4-215ENST00000511843 SEC24BO95487 1268 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 EVCP57679 992 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 PTPN11Q06124 597 aaPredicted RBP15.22■□□□□ 0.03
RNF4-215ENST00000511843 JAKMIP3Q5VZ66 844 aa15.22■□□□□ 0.03
RNF4-215ENST00000511843 XRRA1Q6P2D8 792 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms