RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 PDE12Q6L8Q7 609 aaKnown RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 TATDN1Q6P1N9 297 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 Q6ZNB5 142 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 PLEKHH3Q7Z736 793 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 EAF2Q96CJ1 260 aaPredicted RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 ZNF512BQ96KM6 892 aaPredicted RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 C12orf42Q96LP6 360 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 UBE2OQ9C0C9 1292 aaKnown RBP8.08□□□□□ -1.12
COPS4-209ENST00000511653 ANTXR1Q9H6X2 564 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 GINM1Q9NU53 330 aa8.08□□□□□ -1.12
COPS4-209ENST00000511653 TRANK1O15050 2925 aa8.07□□□□□ -1.12
COPS4-209ENST00000511653 SHMT1P34896 483 aa8.07□□□□□ -1.12
COPS4-209ENST00000511653 ATP8B2P98198 1209 aa8.07□□□□□ -1.12
COPS4-209ENST00000511653 RAB3GAP1Q15042 981 aa8.07□□□□□ -1.12
COPS4-209ENST00000511653 MAGEB6Q8N7X4 407 aa8.07□□□□□ -1.12
COPS4-209ENST00000511653 KIFC2Q96AC6 838 aa8.07□□□□□ -1.12
COPS4-209ENST00000511653 FEZ1Q99689 392 aa8.07□□□□□ -1.12
COPS4-209ENST00000511653 BACH2Q9BYV9 841 aa8.07□□□□□ -1.12
COPS4-209ENST00000511653 BTBD7Q9P203 1132 aa8.07□□□□□ -1.12
COPS4-209ENST00000511653 MCM3APO60318 1980 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 CPNE3O75131 537 aaKnown RBP8.06□□□□□ -1.12
COPS4-209ENST00000511653 PPFIA3O75145 1194 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 GUCY1A2P33402 732 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 PLCD1P51178 756 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 DAB2P98082 770 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 LBRQ14739 615 aaKnown RBP8.06□□□□□ -1.12
COPS4-209ENST00000511653 WDR78Q5VTH9 848 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 ZKSCAN2Q63HK3 967 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 CATSPERGQ6ZRH7 1159 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 CCAR1Q8IX12 1150 aaKnown RBP8.06□□□□□ -1.12
COPS4-209ENST00000511653 TRPV1Q8NER1 839 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 NPLOC4Q8TAT6 608 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 RIOK1Q9BRS2 568 aaKnown RBP8.06□□□□□ -1.12
COPS4-209ENST00000511653 EHD4Q9H223 541 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 MTMR10Q9NXD2 777 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 KANSL3Q9P2N6 904 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 SERPINB13Q9UIV8 391 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 FNDC3AQ9Y2H6 1198 aaKnown RBP8.06□□□□□ -1.12
COPS4-209ENST00000511653 NOP58Q9Y2X3 529 aaKnown RBP8.06□□□□□ -1.12
COPS4-209ENST00000511653 RABGAP1Q9Y3P9 1069 aa8.06□□□□□ -1.12
COPS4-209ENST00000511653 CCER2I3L3R5 266 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 MMP20O60882 483 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 RPLP1P05386 114 aaKnown RBP8.05□□□□□ -1.12
COPS4-209ENST00000511653 EPB42P16452 691 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 CYP2C19P33261 490 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 GRB14Q14449 540 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 ABCB5Q2M3G0 1257 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 TSNAXIP1Q2TAA8 658 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 TTC16Q8NEE8 873 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 CCDC74AQ96AQ1 378 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 EDC3Q96F86 508 aaKnown RBP8.05□□□□□ -1.12
COPS4-209ENST00000511653 KIAA1683Q9H0B3 1180 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 RPAP3Q9H6T3 665 aaPredicted RBP8.05□□□□□ -1.12
COPS4-209ENST00000511653 CWC22Q9HCG8 908 aaKnown RBP8.05□□□□□ -1.12
COPS4-209ENST00000511653 LATS2Q9NRM7 1088 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 EXOC6BQ9Y2D4 811 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 STXBP5LQ9Y2K9 1186 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 XIRP2A4UGR9 3374 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 A0A1W2PRG0 241 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 PHACTR2O75167 634 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 CTBSQ01459 385 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 GABPAQ06546 454 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 CCINQ13939 588 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 SEPT2Q15019 361 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 CERKLQ49MI3 558 aaPredicted RBP8.05□□□□□ -1.12
COPS4-209ENST00000511653 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.05□□□□□ -1.12
COPS4-209ENST00000511653 KIAA1755Q5JYT7 1200 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 CEP85Q6P2H3 762 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 FIGNL1Q6PIW4 674 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 LBX2Q6XYB7 198 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 ITPRIPQ8IWB1 547 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 VWA5B2Q8N398 1253 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 GUCD1Q96NT3 240 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 OSBPL7Q9BZF2 842 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 SENP6Q9GZR1 1112 aaPredicted RBP8.05□□□□□ -1.12
COPS4-209ENST00000511653 NPHS2Q9NP85 383 aa8.05□□□□□ -1.12
COPS4-209ENST00000511653 ABI2Q9NYB9 513 aaPredicted RBP8.05□□□□□ -1.12
COPS4-209ENST00000511653 DDX20Q9UHI6 824 aaKnown RBP8.05□□□□□ -1.12
COPS4-209ENST00000511653 GREB1LQ9C091 1923 aaPredicted RBP8.04□□□□□ -1.12
COPS4-209ENST00000511653 SLC15A5A6NIM6 579 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 HOXC6P09630 235 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 CTSHP09668 335 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 CYP2D6P10635 497 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 CYBAP13498 195 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 ACPPP15309 386 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 VAMP1P23763 118 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 CNGA1P29973 690 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 USP14P54578 494 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 CCNA1P78396 465 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 MFSD14CQ5VZR4 134 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 ANO1Q5XXA6 986 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 AACSQ86V21 672 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 FTSJ3Q8IY81 847 aaKnown RBP8.04□□□□□ -1.12
COPS4-209ENST00000511653 SLC44A5Q8NCS7 719 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 DNAJC25Q9H1X3 360 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 IL1RAPL2Q9NP60 686 aa8.04□□□□□ -1.12
COPS4-209ENST00000511653 MYH4Q9Y623 1939 aa8.03□□□□□ -1.12
COPS4-209ENST00000511653 CDC14CA4D256 554 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms