RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 FOXN1O15353 648 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 RPA1P27694 616 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 ERCC5P28715 1186 aaPredicted RBP17.07■□□□□ 0.32
SCLT1-209ENST00000511426 PGM5Q15124 567 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 NSMFQ6X4W1 530 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 SLC30A10Q6XR72 485 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 SV2BQ7L1I2 683 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 NEK9Q8TD19 979 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 C7orf25Q9BPX7 421 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 JADE2Q9NQC1 790 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 VAV3Q9UKW4 847 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 RIPK3Q9Y572 518 aa17.07■□□□□ 0.32
SCLT1-209ENST00000511426 UTRNP46939 3433 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 COL11A1P12107 1806 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-209ENST00000511426 TRAF5O00463 557 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 BIN1O00499 593 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 PSMD10O75832 226 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 CCND2P30279 289 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 BAATQ14032 418 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-209ENST00000511426 LRCH2Q5VUJ6 765 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 ARHGEF16Q5VV41 709 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 SARM1Q6SZW1 724 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 LUZP1Q86V48 1076 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 CDHR1Q96JP9 859 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 IWS1Q96ST2 819 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 MTRQ99707 1265 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 POLR3CQ9BUI4 534 aaPredicted RBP17.06■□□□□ 0.32
SCLT1-209ENST00000511426 SPATC1LQ9H0A9 340 aa17.06■□□□□ 0.32
SCLT1-209ENST00000511426 CCT6AP40227 531 aaKnown RBP17.05■□□□□ 0.32
SCLT1-209ENST00000511426 MYL5Q02045 173 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 GPAT2Q6NUI2 795 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 OTOP1Q7RTM1 612 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 RAD54LQ92698 747 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 GPRASP2Q96D09 838 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 PNMA5Q96PV4 448 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 TAAR1Q96RJ0 339 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 ZNF577Q9BSK1 485 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 TEKT3Q9BXF9 490 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 TRIM9Q9C026 710 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 A1CFQ9NQ94 594 aaKnown RBP17.05■□□□□ 0.32
SCLT1-209ENST00000511426 TBC1D22BQ9NU19 505 aa17.05■□□□□ 0.32
SCLT1-209ENST00000511426 LOC102724159A0A0B4J2E5 919 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 B4DLN1 442 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 IPO5O00410 1097 aaKnown RBP17.04■□□□□ 0.32
SCLT1-209ENST00000511426 GAS7O60861 476 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
SCLT1-209ENST00000511426 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
SCLT1-209ENST00000511426 PLS1Q14651 629 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 PWP2Q15269 919 aaKnown RBP17.04■□□□□ 0.32
SCLT1-209ENST00000511426 ZNF658Q5TYW1 1059 aaPredicted RBP17.04■□□□□ 0.32
SCLT1-209ENST00000511426 NLRX1Q86UT6 975 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 VSIG10LQ86VR7 867 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 DHX40Q8IX18 779 aaKnown RBP17.04■□□□□ 0.32
SCLT1-209ENST00000511426 GRAMD1CQ8IYS0 662 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 SHCBP1Q8NEM2 672 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 BLOC1S4Q9NUP1 217 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 SMCHD1A6NHR9 2005 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 PVALEFA0A1B0GWK0 134 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 RHOBTB3O94955 611 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 ITGB5P18084 799 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 GJA5P36382 358 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 MTMR1Q13613 665 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 CUL4BQ13620 913 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 B3GNT9Q6UX72 402 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 ANKRD23Q86SG2 305 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 CYP2W1Q8TAV3 490 aa17.04■□□□□ 0.32
SCLT1-209ENST00000511426 MPHOSPH6Q99547 160 aaKnown RBP17.04■□□□□ 0.32
SCLT1-209ENST00000511426 BMP2KQ9NSY1 1161 aaPredicted RBP17.04■□□□□ 0.32
SCLT1-209ENST00000511426 ADD3Q9UEY8 706 aaKnown RBP17.04■□□□□ 0.32
SCLT1-209ENST00000511426 MRPS9P82933 396 aaKnown RBP17.03■□□□□ 0.32
SCLT1-209ENST00000511426 COBLL1Q53SF7 1204 aa17.03■□□□□ 0.32
SCLT1-209ENST00000511426 NCAPH2Q6IBW4 605 aa17.03■□□□□ 0.32
SCLT1-209ENST00000511426 RDM1Q8NG50 284 aa17.03■□□□□ 0.32
SCLT1-209ENST00000511426 ENOX1Q8TC92 643 aaKnown RBP17.03■□□□□ 0.32
SCLT1-209ENST00000511426 INPP4AQ96PE3 977 aaPredicted RBP17.03■□□□□ 0.32
SCLT1-209ENST00000511426 MROH8Q9H579 483 aa17.03■□□□□ 0.32
SCLT1-209ENST00000511426 KCNH7Q9NS40 1196 aa17.03■□□□□ 0.32
SCLT1-209ENST00000511426 BTBD7Q9P203 1132 aa17.03■□□□□ 0.32
SCLT1-209ENST00000511426 TCEAL9Q9UHQ7 104 aa17.03■□□□□ 0.32
SCLT1-209ENST00000511426 NR3C2P08235 984 aa17.02■□□□□ 0.32
SCLT1-209ENST00000511426 EIF2AK2P19525 551 aaKnown RBP17.02■□□□□ 0.32
SCLT1-209ENST00000511426 BMP6P22004 513 aa17.02■□□□□ 0.32
SCLT1-209ENST00000511426 GCLCP48506 637 aaPredicted RBP17.02■□□□□ 0.32
SCLT1-209ENST00000511426 EPHA7Q15375 998 aa17.02■□□□□ 0.32
SCLT1-209ENST00000511426 GNPTABQ3T906 1256 aa17.02■□□□□ 0.32
SCLT1-209ENST00000511426 ANKRD35Q8N283 1001 aa17.02■□□□□ 0.32
SCLT1-209ENST00000511426 AOPEPQ8N6M6 819 aa17.02■□□□□ 0.32
SCLT1-209ENST00000511426 MS4A4AQ96JQ5 239 aa17.02■□□□□ 0.32
SCLT1-209ENST00000511426 AGO4Q9HCK5 861 aaKnown RBP17.02■□□□□ 0.32
SCLT1-209ENST00000511426 ZCCHC17Q9NP64 241 aaKnown RBP17.02■□□□□ 0.32
SCLT1-209ENST00000511426 NMRK2Q9NPI5 230 aa17.02■□□□□ 0.32
SCLT1-209ENST00000511426 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
SCLT1-209ENST00000511426 ITGBL1O95965 494 aaPredicted RBP17.01■□□□□ 0.31
SCLT1-209ENST00000511426 UBXN2AP68543 259 aa17.01■□□□□ 0.31
SCLT1-209ENST00000511426 CCNA1P78396 465 aa17.01■□□□□ 0.31
SCLT1-209ENST00000511426 STIM1Q13586 685 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms