RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 HSDL1Q3SXM5 330 aa26.45■■□□□ 1.82
SNF8-209ENST00000510558 RPUSD2Q8IZ73 545 aaKnown RBP26.45■■□□□ 1.82
SNF8-209ENST00000510558 KCNB2Q92953 911 aa26.45■■□□□ 1.82
SNF8-209ENST00000510558 KATNAL1Q9BW62 490 aa26.45■■□□□ 1.82
SNF8-209ENST00000510558 MTIF3Q9H2K0 278 aaKnown RBP26.45■■□□□ 1.82
SNF8-209ENST00000510558 TTYH1Q9H313 450 aaPredicted RBP26.45■■□□□ 1.82
SNF8-209ENST00000510558 PSTPIP2Q9H939 334 aa26.45■■□□□ 1.82
SNF8-209ENST00000510558 CNTNAP5Q8WYK1 1306 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 ZBTB43O43298 467 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 DNAJB2P25686 324 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 ICAM3P32942 547 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 PSEN2P49810 448 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 PTGISQ16647 500 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 RTN1Q16799 776 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 GDF6Q6KF10 455 aaPredicted RBP26.44■■□□□ 1.82
SNF8-209ENST00000510558 VWCEQ96DN2 955 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 ALG1Q9BT22 464 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 MLXIPQ9HAP2 919 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 RTEL1Q9NZ71 1219 aa26.44■■□□□ 1.82
SNF8-209ENST00000510558 GBF1Q92538 1859 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 TMEM265A0A087WTH1 108 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 PITPNM1O00562 1244 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 PPFIA4O75335 1185 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 HSPA4P34932 840 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 MFSD10Q14728 455 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 PCNX4Q63HM2 1172 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 OTOP2Q7RTS6 562 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 HEATR3Q7Z4Q2 680 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 CXXC1Q9P0U4 656 aaPredicted RBP26.43■■□□□ 1.82
SNF8-209ENST00000510558 HDAC6Q9UBN7 1215 aa26.43■■□□□ 1.82
SNF8-209ENST00000510558 KLF18A0A0U1RQI7 1052 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 HAS3O00219 553 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 SEMA3FQ13275 785 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 BFSP2Q13515 415 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 KIAA0753Q2KHM9 967 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 XRRA1Q6P2D8 792 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 C7orf31Q8N865 590 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 RETREG2Q8NC44 543 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 CTAGE1Q96RT6 745 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 GTF2IRD1Q9UHL9 959 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 SNX14Q9Y5W7 946 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 COL6A3P12111 3177 aa26.42■■□□□ 1.82
SNF8-209ENST00000510558 GOLGA8AA7E2F4 631 aa26.41■■□□□ 1.82
SNF8-209ENST00000510558 GOLGA8BA8MQT2 603 aa26.41■■□□□ 1.82
SNF8-209ENST00000510558 GRXCR1A8MXD5 290 aa26.41■■□□□ 1.82
SNF8-209ENST00000510558 SPATA31C2B4DYI2 1134 aa26.41■■□□□ 1.82
SNF8-209ENST00000510558 FIBPO43427 364 aa26.41■■□□□ 1.82
SNF8-209ENST00000510558 PFKMP08237 780 aa26.41■■□□□ 1.82
SNF8-209ENST00000510558 CPA1P15085 419 aa26.41■■□□□ 1.82
SNF8-209ENST00000510558 UBE2SQ16763 222 aa26.41■■□□□ 1.82
SNF8-209ENST00000510558 JAKMIP1Q96N16 626 aaKnown RBP26.41■■□□□ 1.82
SNF8-209ENST00000510558 CDX2Q99626 313 aaPredicted RBP26.41■■□□□ 1.82
SNF8-209ENST00000510558 BCAS3Q9H6U6 928 aa26.41■■□□□ 1.82
SNF8-209ENST00000510558 REC8O95072 547 aa26.4■■□□□ 1.82
SNF8-209ENST00000510558 IQCF3P0C7M6 154 aa26.4■■□□□ 1.82
SNF8-209ENST00000510558 FGD1P98174 961 aa26.4■■□□□ 1.82
SNF8-209ENST00000510558 FUT2Q10981 343 aa26.4■■□□□ 1.82
SNF8-209ENST00000510558 NEDD9Q14511 834 aa26.4■■□□□ 1.82
SNF8-209ENST00000510558 WWC2Q6AWC2 1192 aa26.4■■□□□ 1.82
SNF8-209ENST00000510558 DEFB128Q7Z7B8 93 aa26.4■■□□□ 1.82
SNF8-209ENST00000510558 CCDC155Q8N6L0 562 aa26.4■■□□□ 1.82
SNF8-209ENST00000510558 RFC2P35250 354 aa26.39■■□□□ 1.82
SNF8-209ENST00000510558 PBX2P40425 430 aa26.39■■□□□ 1.82
SNF8-209ENST00000510558 RCAN1P53805 252 aa26.39■■□□□ 1.82
SNF8-209ENST00000510558 BLOC1S2Q6QNY1 142 aa26.39■■□□□ 1.82
SNF8-209ENST00000510558 METTL7BQ6UX53 244 aa26.39■■□□□ 1.82
SNF8-209ENST00000510558 NLRX1Q86UT6 975 aa26.39■■□□□ 1.82
SNF8-209ENST00000510558 CAGE1Q8TC20 777 aa26.39■■□□□ 1.82
SNF8-209ENST00000510558 TIFAQ96CG3 184 aa26.39■■□□□ 1.82
SNF8-209ENST00000510558 PBX4Q9BYU1 374 aa26.39■■□□□ 1.82
SNF8-209ENST00000510558 NAP1L2Q9ULW6 460 aaPredicted RBP26.39■■□□□ 1.82
SNF8-209ENST00000510558 TET1Q8NFU7 2136 aa26.38■■□□□ 1.81
SNF8-209ENST00000510558 SPDYE3A6NKU9 549 aa26.38■■□□□ 1.81
SNF8-209ENST00000510558 NOP56O00567 594 aaKnown RBP26.38■■□□□ 1.81
SNF8-209ENST00000510558 CDC27P30260 824 aa26.38■■□□□ 1.81
SNF8-209ENST00000510558 CYFIP1Q7L576 1253 aa26.38■■□□□ 1.81
SNF8-209ENST00000510558 DHX38Q92620 1227 aaKnown RBP26.38■■□□□ 1.81
SNF8-209ENST00000510558 C16orf70Q9BSU1 422 aa26.38■■□□□ 1.81
SNF8-209ENST00000510558 FAM217BQ9NTX9 383 aaPredicted RBP26.38■■□□□ 1.81
SNF8-209ENST00000510558 NAPAP54920 295 aa26.37■■□□□ 1.81
SNF8-209ENST00000510558 APOBRQ0VD83 1088 aa26.37■■□□□ 1.81
SNF8-209ENST00000510558 Q6ZUG5 572 aa26.37■■□□□ 1.81
SNF8-209ENST00000510558 SLC17A8Q8NDX2 589 aa26.37■■□□□ 1.81
SNF8-209ENST00000510558 AFAP1L1Q8TED9 768 aa26.37■■□□□ 1.81
SNF8-209ENST00000510558 PCDHA6Q9UN73 950 aa26.37■■□□□ 1.81
SNF8-209ENST00000510558 PCDHA8Q9Y5H6 950 aa26.37■■□□□ 1.81
SNF8-209ENST00000510558 V9GY48 417 aaPredicted RBP26.37■■□□□ 1.81
SNF8-209ENST00000510558 ZBBXA8MT70 800 aa26.36■■□□□ 1.81
SNF8-209ENST00000510558 LGALS2P05162 132 aa26.36■■□□□ 1.81
SNF8-209ENST00000510558 TYW1BQ6NUM6 668 aa26.36■■□□□ 1.81
SNF8-209ENST00000510558 PPP1R18Q6NYC8 613 aa26.36■■□□□ 1.81
SNF8-209ENST00000510558 MYLIPQ8WY64 445 aa26.36■■□□□ 1.81
SNF8-209ENST00000510558 BRF1Q92994 677 aa26.36■■□□□ 1.81
SNF8-209ENST00000510558 SENP7Q9BQF6 1050 aa26.36■■□□□ 1.81
SNF8-209ENST00000510558 SLC4A7Q9Y6M7 1214 aa26.36■■□□□ 1.81
SNF8-209ENST00000510558 H3BRB1 525 aa26.35■■□□□ 1.81
SNF8-209ENST00000510558 METAP2P50579 478 aaKnown RBP eCLIP26.35■■□□□ 1.81
SNF8-209ENST00000510558 RBL2Q08999 1139 aa26.35■■□□□ 1.81
SNF8-209ENST00000510558 RAB30Q15771 203 aa26.35■■□□□ 1.81
SNF8-209ENST00000510558 GPRASP2Q96D09 838 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms