RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 PPP1R13LQ8WUF5 828 aa30.78■■■□□ 2.52
SNF8-208ENST00000510195 SPATA33Q96N06 139 aa30.78■■■□□ 2.52
SNF8-208ENST00000510195 ZBBXA8MT70 800 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 PIK3CDO00329 1044 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 GGPS1O95749 300 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 ICAM3P32942 547 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 MFSD10Q14728 455 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 CUL5Q93034 780 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 CTAGE1Q96RT6 745 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 GAS2L1Q99501 681 aaPredicted RBP30.77■■■□□ 2.52
SNF8-208ENST00000510195 MYL10Q9BUA6 226 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 SLC28A3Q9HAS3 691 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 PCDHA11Q9Y5I1 949 aa30.77■■■□□ 2.52
SNF8-208ENST00000510195 ATP2A2P16615 1042 aaKnown RBP30.76■■■□□ 2.51
SNF8-208ENST00000510195 UBA1P22314 1058 aaKnown RBP30.76■■■□□ 2.51
SNF8-208ENST00000510195 KIAA0753Q2KHM9 967 aa30.76■■■□□ 2.51
SNF8-208ENST00000510195 HSDL1Q3SXM5 330 aa30.76■■■□□ 2.51
SNF8-208ENST00000510195 XRRA1Q6P2D8 792 aa30.76■■■□□ 2.51
SNF8-208ENST00000510195 PHOSPHO2Q8TCD6 241 aa30.76■■■□□ 2.51
SNF8-208ENST00000510195 INPP4AQ96PE3 977 aaPredicted RBP30.76■■■□□ 2.51
SNF8-208ENST00000510195 MLXIPQ9HAP2 919 aa30.76■■■□□ 2.51
SNF8-208ENST00000510195 HDAC6Q9UBN7 1215 aa30.76■■■□□ 2.51
SNF8-208ENST00000510195 SLC12A7Q9Y666 1083 aa30.76■■■□□ 2.51
SNF8-208ENST00000510195 MYO9BQ13459 2157 aa30.76■■■□□ 2.51
SNF8-208ENST00000510195 SCN5AQ14524 2016 aa30.75■■■□□ 2.51
SNF8-208ENST00000510195 SP2Q02086 613 aa30.75■■■□□ 2.51
SNF8-208ENST00000510195 SGMS1Q86VZ5 419 aa30.75■■■□□ 2.51
SNF8-208ENST00000510195 SMARCC2Q8TAQ2 1214 aa30.75■■■□□ 2.51
SNF8-208ENST00000510195 PIBF1Q8WXW3 757 aa30.75■■■□□ 2.51
SNF8-208ENST00000510195 TANC1Q9C0D5 1861 aa30.75■■■□□ 2.51
SNF8-208ENST00000510195 TRIP12Q14669 1992 aaPredicted RBP30.74■■■□□ 2.51
SNF8-208ENST00000510195 SELPP16109 830 aa30.74■■■□□ 2.51
SNF8-208ENST00000510195 MRPS9P82933 396 aaKnown RBP30.74■■■□□ 2.51
SNF8-208ENST00000510195 NEDD9Q14511 834 aa30.74■■■□□ 2.51
SNF8-208ENST00000510195 SRBD1Q8N5C6 995 aaKnown RBP30.74■■■□□ 2.51
SNF8-208ENST00000510195 BAIAP3O94812 1187 aa30.73■■■□□ 2.51
SNF8-208ENST00000510195 ZNF286BP0CG31 522 aa30.73■■■□□ 2.51
SNF8-208ENST00000510195 PTK7Q13308 1070 aa30.73■■■□□ 2.51
SNF8-208ENST00000510195 SLC9A7Q96T83 725 aa30.73■■■□□ 2.51
SNF8-208ENST00000510195 ALG1Q9BT22 464 aa30.73■■■□□ 2.51
SNF8-208ENST00000510195 FTOQ9C0B1 505 aaKnown RBP eCLIP30.73■■■□□ 2.51
SNF8-208ENST00000510195 NKX2-4Q9H2Z4 354 aa30.73■■■□□ 2.51
SNF8-208ENST00000510195 YBX2Q9Y2T7 364 aaKnown RBP30.73■■■□□ 2.51
SNF8-208ENST00000510195 CHD7Q9P2D1 2997 aa30.73■■■□□ 2.51
SNF8-208ENST00000510195 SPATA31C2B4DYI2 1134 aa30.72■■■□□ 2.51
SNF8-208ENST00000510195 MEIS2O14770 477 aa30.72■■■□□ 2.51
SNF8-208ENST00000510195 PLEKHA8P1O95397 391 aa30.72■■■□□ 2.51
SNF8-208ENST00000510195 PCNX4Q63HM2 1172 aa30.72■■■□□ 2.51
SNF8-208ENST00000510195 FANCBQ8NB91 859 aa30.72■■■□□ 2.51
SNF8-208ENST00000510195 VCANP13611 3396 aa30.71■■■□□ 2.51
SNF8-208ENST00000510195 FIBPO43427 364 aa30.71■■■□□ 2.51
SNF8-208ENST00000510195 TSGA10IPQ3SY00 556 aa30.71■■■□□ 2.51
SNF8-208ENST00000510195 DHX38Q92620 1227 aaKnown RBP30.71■■■□□ 2.51
SNF8-208ENST00000510195 C16orf70Q9BSU1 422 aa30.71■■■□□ 2.51
SNF8-208ENST00000510195 PRDM12Q9H4Q4 367 aa30.71■■■□□ 2.51
SNF8-208ENST00000510195 GBF1Q92538 1859 aa30.71■■■□□ 2.51
SNF8-208ENST00000510195 USP17L6PQ6QN14 398 aa30.7■■■□□ 2.51
SNF8-208ENST00000510195 METTL7BQ6UX53 244 aa30.7■■■□□ 2.51
SNF8-208ENST00000510195 SYNE3Q6ZMZ3 975 aa30.7■■■□□ 2.51
SNF8-208ENST00000510195 LRRC8DQ7L1W4 858 aa30.7■■■□□ 2.51
SNF8-208ENST00000510195 GPKOWQ92917 476 aaPredicted RBP eCLIP30.7■■■□□ 2.51
SNF8-208ENST00000510195 NEK1Q96PY6 1258 aa30.7■■■□□ 2.51
SNF8-208ENST00000510195 SENP7Q9BQF6 1050 aa30.7■■■□□ 2.51
SNF8-208ENST00000510195 USP26Q9BXU7 913 aa30.7■■■□□ 2.51
SNF8-208ENST00000510195 CKBP12277 381 aa30.69■■■□□ 2.5
SNF8-208ENST00000510195 RABGGTBP53611 331 aa30.69■■■□□ 2.5
SNF8-208ENST00000510195 COL9A3Q14050 684 aaPredicted RBP30.69■■■□□ 2.5
SNF8-208ENST00000510195 ZFP91Q96JP5 570 aaPredicted RBP30.69■■■□□ 2.5
SNF8-208ENST00000510195 PSTPIP2Q9H939 334 aa30.69■■■□□ 2.5
SNF8-208ENST00000510195 TET1Q8NFU7 2136 aa30.68■■■□□ 2.5
SNF8-208ENST00000510195 H3BRB1 525 aa30.68■■■□□ 2.5
SNF8-208ENST00000510195 NOP56O00567 594 aaKnown RBP30.68■■■□□ 2.5
SNF8-208ENST00000510195 CXCL10P02778 98 aa30.68■■■□□ 2.5
SNF8-208ENST00000510195 PPP2R2DQ66LE6 453 aa30.68■■■□□ 2.5
SNF8-208ENST00000510195 TMTC3Q6ZXV5 915 aa30.68■■■□□ 2.5
SNF8-208ENST00000510195 TEX2Q8IWB9 1127 aa30.68■■■□□ 2.5
SNF8-208ENST00000510195 GIMAP8Q8ND71 665 aaPredicted RBP30.68■■■□□ 2.5
SNF8-208ENST00000510195 TUT1Q9H6E5 874 aaKnown RBP30.68■■■□□ 2.5
SNF8-208ENST00000510195 CDC45O75419 566 aa30.67■■■□□ 2.5
SNF8-208ENST00000510195 RXRAP19793 462 aa30.67■■■□□ 2.5
SNF8-208ENST00000510195 NLRX1Q86UT6 975 aa30.67■■■□□ 2.5
SNF8-208ENST00000510195 LRRC2Q9BYS8 371 aa30.67■■■□□ 2.5
SNF8-208ENST00000510195 RTEL1Q9NZ71 1219 aa30.67■■■□□ 2.5
SNF8-208ENST00000510195 KIF28PB7ZC32 967 aa30.66■■■□□ 2.5
SNF8-208ENST00000510195 SORBS3O60504 671 aa30.66■■■□□ 2.5
SNF8-208ENST00000510195 EXOSC10Q01780 885 aaKnown RBP30.66■■■□□ 2.5
SNF8-208ENST00000510195 SEMA3FQ13275 785 aa30.66■■■□□ 2.5
SNF8-208ENST00000510195 KRT32Q14532 448 aa30.66■■■□□ 2.5
SNF8-208ENST00000510195 GPNMBQ14956 572 aa30.66■■■□□ 2.5
SNF8-208ENST00000510195 TRIM71Q2Q1W2 868 aaKnown RBP30.66■■■□□ 2.5
SNF8-208ENST00000510195 CYFIP1Q7L576 1253 aa30.66■■■□□ 2.5
SNF8-208ENST00000510195 DHX32Q7L7V1 743 aaKnown RBP30.66■■■□□ 2.5
SNF8-208ENST00000510195 CMTR1Q8N1G2 835 aaKnown RBP30.66■■■□□ 2.5
SNF8-208ENST00000510195 CDHR1Q96JP9 859 aa30.66■■■□□ 2.5
SNF8-208ENST00000510195 RBM28Q9NW13 759 aaKnown RBP30.66■■■□□ 2.5
SNF8-208ENST00000510195 LGALS2P05162 132 aa30.65■■■□□ 2.5
SNF8-208ENST00000510195 HOXC8P31273 242 aa30.65■■■□□ 2.5
SNF8-208ENST00000510195 CNKSR3Q6P9H4 555 aa30.65■■■□□ 2.5
SNF8-208ENST00000510195 MICU3Q86XE3 530 aa30.65■■■□□ 2.5
SNF8-208ENST00000510195 COL25A1Q9BXS0 654 aaPredicted RBP30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms