RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 PPP1R11O60927 126 aaPredicted RBP17.22■□□□□ 0.35
SMAD5-206ENST00000509962 NBNO60934 754 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 EFCAB14O75071 495 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 ARHGEF15O94989 841 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 F2P00734 622 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 CXCL10P02778 98 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 POLR2MP0CAP2 368 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 TGFB3P10600 412 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 GHRHRQ02643 423 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 GRB10Q13322 594 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 PGM5Q15124 567 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 KRT40Q6A162 431 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 TMCO2Q7Z6W1 182 aaPredicted RBP17.22■□□□□ 0.35
SMAD5-206ENST00000509962 HOMER1Q86YM7 354 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 MLXIPQ9HAP2 919 aa17.22■□□□□ 0.35
SMAD5-206ENST00000509962 PRRC2BQ5JSZ5 2229 aaKnown RBP17.21■□□□□ 0.35
SMAD5-206ENST00000509962 IFIT3O14879 490 aaKnown RBP17.21■□□□□ 0.35
SMAD5-206ENST00000509962 RGS20O76081 388 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 GGPS1O95749 300 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 CCND2P30279 289 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 KCNQ1P51787 676 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 ZNF200P98182 395 aaPredicted RBP17.21■□□□□ 0.35
SMAD5-206ENST00000509962 HSDL1Q3SXM5 330 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 ZNF618Q5T7W0 954 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 FCHSD1Q86WN1 690 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 RUFY2Q8WXA3 655 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 HLA-CQ95604 372 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 PIGSQ96S52 555 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 RAD9AQ99638 391 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
SMAD5-206ENST00000509962 CHD7Q9P2D1 2997 aa17.21■□□□□ 0.35
SMAD5-206ENST00000509962 HOXD8P13378 290 aaPredicted RBP17.2■□□□□ 0.34
SMAD5-206ENST00000509962 DEFB103AP81534 67 aa17.2■□□□□ 0.34
SMAD5-206ENST00000509962 SP2Q02086 613 aa17.2■□□□□ 0.34
SMAD5-206ENST00000509962 ZFP91Q96JP5 570 aaPredicted RBP17.2■□□□□ 0.34
SMAD5-206ENST00000509962 NECAB3Q96P71 396 aaPredicted RBP17.2■□□□□ 0.34
SMAD5-206ENST00000509962 RIOX1Q9H6W3 641 aa17.2■□□□□ 0.34
SMAD5-206ENST00000509962 LMCD1Q9NZU5 365 aa17.2■□□□□ 0.34
SMAD5-206ENST00000509962 PNMA6FA0A0J9YX94 578 aa17.19■□□□□ 0.34
SMAD5-206ENST00000509962 LCHNA4D1U4 455 aa17.19■□□□□ 0.34
SMAD5-206ENST00000509962 GJB5O95377 273 aa17.19■□□□□ 0.34
SMAD5-206ENST00000509962 GRM4Q14833 912 aa17.19■□□□□ 0.34
SMAD5-206ENST00000509962 SART3Q15020 963 aaKnown RBP17.19■□□□□ 0.34
SMAD5-206ENST00000509962 TRIM71Q2Q1W2 868 aaKnown RBP17.19■□□□□ 0.34
SMAD5-206ENST00000509962 FAM117BQ6P1L5 589 aa17.19■□□□□ 0.34
SMAD5-206ENST00000509962 IL25Q9H293 177 aa17.19■□□□□ 0.34
SMAD5-206ENST00000509962 C17orf102A2RUQ5 167 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 RSPH10B2B2RC85 870 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 H3BRB1 525 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 LPXNO60711 386 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 LGR5O75473 907 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 CYP21A2P08686 494 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 RSPH10BP0C881 870 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 UBA1P22314 1058 aaKnown RBP17.18■□□□□ 0.34
SMAD5-206ENST00000509962 THPOP40225 353 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 WTAPQ15007 396 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 TCTN1Q2MV58 587 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 SPRED2Q7Z698 418 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 RALYLQ86SE5 291 aaKnown RBP17.18■□□□□ 0.34
SMAD5-206ENST00000509962 NCOA7Q8NI08 942 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 IL31RAQ8NI17 732 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 ATP6V0A1Q93050 837 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 WNT8BQ93098 351 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 TGS1Q96RS0 853 aaKnown RBP17.18■□□□□ 0.34
SMAD5-206ENST00000509962 C16orf70Q9BSU1 422 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 TUT1Q9H6E5 874 aaKnown RBP17.18■□□□□ 0.34
SMAD5-206ENST00000509962 MTUS1Q9ULD2 1270 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 EMSYQ7Z589 1322 aa17.18■□□□□ 0.34
SMAD5-206ENST00000509962 TRANK1O15050 2925 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 ERVK-21P61565 698 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 HIC1Q14526 733 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 GNPTABQ3T906 1256 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 TTC22Q5TAA0 569 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 TRAF7Q6Q0C0 670 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 CATIPQ7Z7H3 387 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 SERINC5Q86VE9 423 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 C1QTNF1Q9BXJ1 281 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 SUGCTQ9HAC7 445 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 INSL6Q9Y581 213 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 PTPRSQ13332 1948 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 NCOR1O75376 2440 aa17.17■□□□□ 0.34
SMAD5-206ENST00000509962 BDP1A6H8Y1 2624 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 LINC01553A4QN01 128 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 NOP56O00567 594 aaKnown RBP17.16■□□□□ 0.34
SMAD5-206ENST00000509962 STAM2O75886 525 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 AMHP03971 560 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 PTH1RQ03431 593 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 NEDD9Q14511 834 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 MBTPS1Q14703 1052 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 SLC35G1Q2M3R5 365 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 DBF4BQ8NFT6 615 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 GDPD5Q8WTR4 605 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 GPKOWQ92917 476 aaPredicted RBP eCLIP17.16■□□□□ 0.34
SMAD5-206ENST00000509962 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 RNPEPQ9H4A4 650 aa17.16■□□□□ 0.34
SMAD5-206ENST00000509962 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
SMAD5-206ENST00000509962 E7EWF7 191 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 CYTH3O43739 400 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 GNAT1P11488 350 aa17.15■□□□□ 0.34
SMAD5-206ENST00000509962 GSPT1P15170 499 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms