RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 FRMPD4Q14CM0 1322 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 TRIM43BA6NCK2 446 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 RGS20O76081 388 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 HSP90AA1P07900 732 aaKnown RBP12.95□□□□□ -0.34
SIL1-212ENST00000509400 SYT1P21579 422 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 PTGS1P23219 599 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 PDE4DQ08499 809 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 ACVR2BQ13705 512 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 TAPT1Q6NXT6 567 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 FBXO16Q8IX29 292 aaPredicted RBP12.95□□□□□ -0.34
SIL1-212ENST00000509400 MSL3Q8N5Y2 521 aaKnown RBP12.95□□□□□ -0.34
SIL1-212ENST00000509400 CYP2W1Q8TAV3 490 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 TRIM43Q96BQ3 446 aaPredicted RBP12.95□□□□□ -0.34
SIL1-212ENST00000509400 ZHX1Q9UKY1 873 aaPredicted RBP12.95□□□□□ -0.34
SIL1-212ENST00000509400 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 CHD7Q9P2D1 2997 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 ZNF236Q9UL36 1845 aa12.95□□□□□ -0.34
SIL1-212ENST00000509400 SYNGAP1Q96PV0 1343 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 H3BQV1 296 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 MSCO60682 206 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 ITGB8P26012 769 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 SREBF1P36956 1147 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 ARHGAP4P98171 946 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 SNX17Q15036 470 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 STXBP2Q15833 593 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 INF2Q27J81 1249 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 TRIM60Q495X7 471 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 SEPT14Q6ZU15 432 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 PIK3AP1Q6ZUJ8 805 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 TEX2Q8IWB9 1127 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 CRYGNQ8WXF5 182 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 PDLIM7Q9NR12 457 aa12.94□□□□□ -0.34
SIL1-212ENST00000509400 CCDC194A0A1B0GVG4 234 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.93□□□□□ -0.34
SIL1-212ENST00000509400 WNT7AO00755 349 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 ADCY6O43306 1168 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 EIF3JO75822 258 aaKnown RBP12.93□□□□□ -0.34
SIL1-212ENST00000509400 CCND2P30279 289 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 EPHB4P54760 987 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 SAFBQ15424 915 aaKnown RBP eCLIP12.93□□□□□ -0.34
SIL1-212ENST00000509400 PCNX4Q63HM2 1172 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 KRT25Q7Z3Z0 450 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 UIMC1Q96RL1 719 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 ABHD16BQ9H3Z7 469 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 BRMS1Q9HCU9 246 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 PRDM5Q9NQX1 630 aaPredicted RBP12.93□□□□□ -0.34
SIL1-212ENST00000509400 PRKAG2Q9UGJ0 569 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 MTMR6Q9Y217 621 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 CNPY2Q9Y2B0 182 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 UBIAD1Q9Y5Z9 338 aa12.93□□□□□ -0.34
SIL1-212ENST00000509400 LOC102724159A0A0B4J2E5 919 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 VPS37CA5D8V6 355 aaPredicted RBP12.92□□□□□ -0.34
SIL1-212ENST00000509400 B4DLN1 442 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 ARIH2O95376 493 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 CYP3A4P08684 503 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 ITGB5P18084 799 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 ATP2B1P20020 1258 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 ANP32AP39687 249 aaKnown RBP12.92□□□□□ -0.34
SIL1-212ENST00000509400 SMAD3P84022 425 aaKnown RBP12.92□□□□□ -0.34
SIL1-212ENST00000509400 SEMA3FQ13275 785 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 PKP1Q13835 747 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 NONOQ15233 471 aaKnown RBP eCLIP12.92□□□□□ -0.34
SIL1-212ENST00000509400 PWP2Q15269 919 aaKnown RBP12.92□□□□□ -0.34
SIL1-212ENST00000509400 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 COPS5Q92905 334 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 FERMT2Q96AC1 680 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 LENG1Q96BZ8 264 aaPredicted RBP12.92□□□□□ -0.34
SIL1-212ENST00000509400 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 WDR11Q9BZH6 1224 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 FOXP1Q9H334 677 aaPredicted RBP12.92□□□□□ -0.34
SIL1-212ENST00000509400 BCAS3Q9H6U6 928 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 VTA1Q9NP79 307 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
SIL1-212ENST00000509400 ZNFX1Q9P2E3 1918 aaKnown RBP12.92□□□□□ -0.34
SIL1-212ENST00000509400 RBM47A0AV96 593 aaKnown RBP12.91□□□□□ -0.34
SIL1-212ENST00000509400 FAM86B1E9PN63 330 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 SEPT4O43236 478 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 TDP2O95551 362 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 FAM86B2P0C5J1 330 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 ARP10275 920 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 SMPD1P17405 629 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.34
SIL1-212ENST00000509400 ZNF76P36508 570 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
SIL1-212ENST00000509400 SP2Q02086 613 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 LRRC41Q15345 812 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 FOXD4L5Q5VV16 416 aaPredicted RBP12.91□□□□□ -0.34
SIL1-212ENST00000509400 MCTP2Q6DN12 878 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 CCDC62Q6P9F0 684 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 USP38Q8NB14 1042 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 ARRDC4Q8NCT1 418 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 FOXD4L4Q8WXT5 416 aaPredicted RBP12.91□□□□□ -0.34
SIL1-212ENST00000509400 MPHOSPH6Q99547 160 aaKnown RBP12.91□□□□□ -0.34
SIL1-212ENST00000509400 EHMT1Q9H9B1 1298 aa12.91□□□□□ -0.34
SIL1-212ENST00000509400 JADE2Q9NQC1 790 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms