RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CHD7Q9P2D1 2997 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 ST18O60284 1047 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 RGS20O76081 388 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 MYCLP12524 364 aaPredicted RBP16.86■□□□□ 0.29
HMGCL-208ENST00000509389 HOXA13P31271 388 aaPredicted RBP16.86■□□□□ 0.29
HMGCL-208ENST00000509389 MCM2P49736 904 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 TMEM67Q5HYA8 995 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 VSIG10LQ86VR7 867 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 DHX37Q8IY37 1157 aaKnown RBP16.86■□□□□ 0.29
HMGCL-208ENST00000509389 SAMD3Q8N6K7 520 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 CCDC155Q8N6L0 562 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 CAGE1Q8TC20 777 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 DHX38Q92620 1227 aaKnown RBP16.86■□□□□ 0.29
HMGCL-208ENST00000509389 SLC9A7Q96T83 725 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 HDAC6Q9UBN7 1215 aa16.86■□□□□ 0.29
HMGCL-208ENST00000509389 ERICH2A1L162 156 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 E7EWF7 191 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 K7ELQ4 463 aaPredicted RBP16.85■□□□□ 0.29
HMGCL-208ENST00000509389 CYTH3O43739 400 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 CA3P07451 260 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 PSMA5P28066 241 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 PSEN2P49810 448 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 COL9A3Q14050 684 aaPredicted RBP16.85■□□□□ 0.29
HMGCL-208ENST00000509389 WTAPQ15007 396 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 PGM5Q15124 567 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 RUFY3Q7L099 469 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 RALYLQ86SE5 291 aaKnown RBP16.85■□□□□ 0.29
HMGCL-208ENST00000509389 HSCBQ8IWL3 235 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 NCOA7Q8NI08 942 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 IL31RAQ8NI17 732 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 PPTC7Q8NI37 304 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 PHOSPHO2Q8TCD6 241 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 AFAP1L1Q8TED9 768 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 JAKMIP1Q96N16 626 aaKnown RBP16.85■□□□□ 0.29
HMGCL-208ENST00000509389 ALG1Q9BT22 464 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 UPF3BQ9BZI7 483 aaKnown RBP16.85■□□□□ 0.29
HMGCL-208ENST00000509389 GTF2IRD1Q9UHL9 959 aa16.85■□□□□ 0.29
HMGCL-208ENST00000509389 PTPRSQ13332 1948 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 HAS3O00219 553 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 F2P00734 622 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 ZNF286BP0CG31 522 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 SELPP16109 830 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 NEK4P51957 841 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 TROAPQ12815 778 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 TRAF1Q13077 416 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 MFSD10Q14728 455 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 GPNMBQ14956 572 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 MYSM1Q5VVJ2 828 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 KCNV1Q6PIU1 500 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 FBXL16Q8N461 479 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 C7orf31Q8N865 590 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 KATNAL1Q9BW62 490 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 AGXT2Q9BYV1 514 aa16.84■□□□□ 0.29
HMGCL-208ENST00000509389 PNMA6FA0A0J9YX94 578 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 GCOM1H8Y6P7 765 aaPredicted RBP16.83■□□□□ 0.28
HMGCL-208ENST00000509389 SORBS3O60504 671 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 BAIAP3O94812 1187 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 POLR2MP0CAP2 368 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 HOXD8P13378 290 aaPredicted RBP16.83■□□□□ 0.28
HMGCL-208ENST00000509389 RPS6KB1P23443 525 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 ANTXR2P58335 489 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 SP2Q02086 613 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 RBL2Q08999 1139 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 KIAA0753Q2KHM9 967 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 CELF3Q5SZQ8 465 aaKnown RBP16.83■□□□□ 0.28
HMGCL-208ENST00000509389 LRRC8DQ7L1W4 858 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 HERC6Q8IVU3 1022 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 ATXN2LQ8WWM7 1075 aaKnown RBP16.83■□□□□ 0.28
HMGCL-208ENST00000509389 ZFP91Q96JP5 570 aaPredicted RBP16.83■□□□□ 0.28
HMGCL-208ENST00000509389 THEGQ9P2T0 379 aa16.83■□□□□ 0.28
HMGCL-208ENST00000509389 RFXAPO00287 272 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 PPFIA4O75335 1185 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 GGPS1O95749 300 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 HMGB1P09429 215 aaKnown RBP16.82■□□□□ 0.28
HMGCL-208ENST00000509389 CKBP12277 381 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 CCND2P30279 289 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 SART3Q15020 963 aaKnown RBP16.82■□□□□ 0.28
HMGCL-208ENST00000509389 HSDL1Q3SXM5 330 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 FCHSD1Q86WN1 690 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 IGDCC4Q8TDY8 1250 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 GPKOWQ92917 476 aaPredicted RBP eCLIP16.82■□□□□ 0.28
HMGCL-208ENST00000509389 SPATA33Q96N06 139 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 CERS4Q9HA82 394 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 CYP46A1Q9Y6A2 500 aa16.82■□□□□ 0.28
HMGCL-208ENST00000509389 PRRC2BQ5JSZ5 2229 aaKnown RBP16.82■□□□□ 0.28
HMGCL-208ENST00000509389 ARHGEF15O94989 841 aa16.81■□□□□ 0.28
HMGCL-208ENST00000509389 TGFB3P10600 412 aa16.81■□□□□ 0.28
HMGCL-208ENST00000509389 UBA1P22314 1058 aaKnown RBP16.81■□□□□ 0.28
HMGCL-208ENST00000509389 PTK7Q13308 1070 aa16.81■□□□□ 0.28
HMGCL-208ENST00000509389 TRIM71Q2Q1W2 868 aaKnown RBP16.81■□□□□ 0.28
HMGCL-208ENST00000509389 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
HMGCL-208ENST00000509389 CATIPQ7Z7H3 387 aa16.81■□□□□ 0.28
HMGCL-208ENST00000509389 MB21D2Q8IYB1 491 aaPredicted RBP16.81■□□□□ 0.28
HMGCL-208ENST00000509389 ASB2Q96Q27 587 aa16.81■□□□□ 0.28
HMGCL-208ENST00000509389 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
HMGCL-208ENST00000509389 NBNO60934 754 aa16.8■□□□□ 0.28
HMGCL-208ENST00000509389 PARNO95453 639 aaKnown RBP16.8■□□□□ 0.28
HMGCL-208ENST00000509389 CXCL10P02778 98 aa16.8■□□□□ 0.28
HMGCL-208ENST00000509389 KCNJ6P48051 423 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms