RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 GNAQP50148 359 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 MRPS9P82933 396 aaKnown RBP14.45□□□□□ -0.1
PDPN-208ENST00000509009 MFSD10Q14728 455 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 KIAA0753Q2KHM9 967 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 CREB3L3Q68CJ9 461 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 SKAP1Q86WV1 359 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 SRBD1Q8N5C6 995 aaKnown RBP14.45□□□□□ -0.1
PDPN-208ENST00000509009 CTCFLQ8NI51 663 aaPredicted RBP14.45□□□□□ -0.1
PDPN-208ENST00000509009 CAGE1Q8TC20 777 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 DHX38Q92620 1227 aaKnown RBP14.45□□□□□ -0.1
PDPN-208ENST00000509009 TTC28Q96AY4 2481 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 RRP36Q96EU6 259 aaKnown RBP14.45□□□□□ -0.1
PDPN-208ENST00000509009 SPATA33Q96N06 139 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 LZTS2Q9BRK4 669 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 GTF2IRD1Q9UHL9 959 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 KIAA1217Q5T5P2 1943 aa14.45□□□□□ -0.1
PDPN-208ENST00000509009 SPATA31C2B4DYI2 1134 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 ZNF286BP0CG31 522 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 SELPP16109 830 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 UBA1P22314 1058 aaKnown RBP14.44□□□□□ -0.1
PDPN-208ENST00000509009 ICAM3P32942 547 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 LIFRP42702 1097 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 ADGRE1Q14246 886 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 USP17L6PQ6QN14 398 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 NFXL1Q6ZNB6 911 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 CCDC155Q8N6L0 562 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 USP38Q8NB14 1042 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 PHOSPHO2Q8TCD6 241 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 AFAP1L1Q8TED9 768 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 GAS2L1Q99501 681 aaPredicted RBP14.44□□□□□ -0.1
PDPN-208ENST00000509009 C16orf70Q9BSU1 422 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 KATNAL1Q9BW62 490 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 MLXIPQ9HAP2 919 aa14.44□□□□□ -0.1
PDPN-208ENST00000509009 CCDC69A6NI79 296 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 MEIS2O14770 477 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 STAM2O75886 525 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 PLEKHA8P1O95397 391 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 CKBP12277 381 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 ZNF200P98182 395 aaPredicted RBP14.43□□□□□ -0.1
PDPN-208ENST00000509009 RBL2Q08999 1139 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 PTK7Q13308 1070 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 HIC1Q14526 733 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 BMP2KLQ5H9B9 411 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 CMTR1Q8N1G2 835 aaKnown RBP14.43□□□□□ -0.1
PDPN-208ENST00000509009 INPP4AQ96PE3 977 aaPredicted RBP14.43□□□□□ -0.1
PDPN-208ENST00000509009 ANO2Q9NQ90 1003 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 RTEL1Q9NZ71 1219 aa14.43□□□□□ -0.1
PDPN-208ENST00000509009 FRMPD4Q14CM0 1322 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 TET1Q8NFU7 2136 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 PIK3CDO00329 1044 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 CALM1P0DP23 149 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 CALM2P0DP24 149 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 CALM3P0DP25 149 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 RXRAP19793 462 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 SEMA3FQ13275 785 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 TRIM71Q2Q1W2 868 aaKnown RBP14.42□□□□□ -0.1
PDPN-208ENST00000509009 GNPTABQ3T906 1256 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 LRRC8DQ7L1W4 858 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 FANCBQ8NB91 859 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 SMARCC2Q8TAQ2 1214 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 CUL5Q93034 780 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 LRRC2Q9BYS8 371 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 SCN5AQ14524 2016 aa14.42□□□□□ -0.1
PDPN-208ENST00000509009 TRIP12Q14669 1992 aaPredicted RBP14.42□□□□□ -0.1
PDPN-208ENST00000509009 MYH7BA7E2Y1 1941 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 H3BRB1 525 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 NBNO60934 754 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 PARNO95453 639 aaKnown RBP14.41□□□□□ -0.1
PDPN-208ENST00000509009 CXCL10P02778 98 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 IGFBP4P22692 258 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 EXOSC10Q01780 885 aaKnown RBP14.41□□□□□ -0.1
PDPN-208ENST00000509009 NEDD9Q14511 834 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 PCNX4Q63HM2 1172 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 PPP2R2DQ66LE6 453 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 XRRA1Q6P2D8 792 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 TRAF7Q6Q0C0 670 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 CENPQQ7L2Z9 268 aaPredicted RBP14.41□□□□□ -0.1
PDPN-208ENST00000509009 CYFIP1Q7L576 1253 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 SGMS1Q86VZ5 419 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 HERC6Q8IVU3 1022 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 PPM1EQ8WY54 764 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 WNT8BQ93098 351 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 SLC9A7Q96T83 725 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 TUT1Q9H6E5 874 aaKnown RBP14.41□□□□□ -0.1
PDPN-208ENST00000509009 PSTPIP2Q9H939 334 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 PRDM6Q9NQX0 595 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 SEC63Q9UGP8 760 aaKnown RBP14.41□□□□□ -0.1
PDPN-208ENST00000509009 SLC12A7Q9Y666 1083 aa14.41□□□□□ -0.1
PDPN-208ENST00000509009 TRANK1O15050 2925 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 VCANP13611 3396 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 hCG_1642624A0A1W2PR95 340 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 FIBPO43427 364 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 BAIAP3O94812 1187 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 CA3P07451 260 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 CCDC85BQ15834 202 aaPredicted RBP14.4□□□□□ -0.1
PDPN-208ENST00000509009 TCTN1Q2MV58 587 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 ZNF618Q5T7W0 954 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 METTL7BQ6UX53 244 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 RAB11FIP4Q86YS3 637 aa14.4□□□□□ -0.1
PDPN-208ENST00000509009 CCDC82Q8N4S0 544 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms