RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 SPATA33Q96N06 139 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 MYL10Q9BUA6 226 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 LSG1Q9H089 658 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 LY9Q9HBG7 655 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 SLC12A7Q9Y666 1083 aa11.65□□□□□ -0.54
UBE2D3-227ENST00000508818 BAZ2BQ9UIF8 2168 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 GGPS1O95749 300 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 IQCF3P0C7M6 154 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 ATP2A2P16615 1042 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 SMARCA1P28370 1054 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 MFSD10Q14728 455 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 KIAA0753Q2KHM9 967 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 SLC35G1Q2M3R5 365 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 CELF3Q5SZQ8 465 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 MYSM1Q5VVJ2 828 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 KAT2BQ92831 832 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 SPZ1Q9BXG8 430 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 NKX2-4Q9H2Z4 354 aa11.64□□□□□ -0.55
UBE2D3-227ENST00000508818 KIF28PB7ZC32 967 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 NOP56O00567 594 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 SH2B2O14492 632 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 STAM2O75886 525 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 ZNF286BP0CG31 522 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 LIFRP42702 1097 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 RABGGTBP53611 331 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 NEDD9Q14511 834 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 NECTIN1Q15223 517 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 BMP2KLQ5H9B9 411 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 GDF6Q6KF10 455 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 NLRX1Q86UT6 975 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 SESTD1Q86VW0 696 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 IL31RAQ8NI17 732 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 AFAP1L1Q8TED9 768 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 PPM1EQ8WY54 764 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 PRDM12Q9H4Q4 367 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 RTEL1Q9NZ71 1219 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 HDAC6Q9UBN7 1215 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 PCDHA11Q9Y5I1 949 aa11.63□□□□□ -0.55
UBE2D3-227ENST00000508818 SCN10AQ9Y5Y9 1956 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 RGS20O76081 388 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 PARNO95453 639 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 SELPP16109 830 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 RXRAP19793 462 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 UBA1P22314 1058 aaKnown RBP11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 IGFBP4P22692 258 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 KCNJ6P48051 423 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 XRRA1Q6P2D8 792 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 CCDC82Q8N4S0 544 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 FANCBQ8NB91 859 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 LRRC2Q9BYS8 371 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 PSTPIP2Q9H939 334 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 GTF2IRD1Q9UHL9 959 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 KIAA1217Q5T5P2 1943 aa11.62□□□□□ -0.55
UBE2D3-227ENST00000508818 CDC45O75419 566 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 PLEKHA8P1O95397 391 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 F2P00734 622 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 FGD1P98174 961 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 SP2Q02086 613 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 PTK7Q13308 1070 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 HSDL1Q3SXM5 330 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 USP17L6PQ6QN14 398 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 RAB11FIP4Q86YS3 637 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 SRBD1Q8N5C6 995 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 PHOSPHO2Q8TCD6 241 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 NEK1Q96PY6 1258 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 SLC9A7Q96T83 725 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 ZBED2Q9BTP6 218 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 YBX2Q9Y2T7 364 aaKnown RBP11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 MYO9BQ13459 2157 aa11.61□□□□□ -0.55
UBE2D3-227ENST00000508818 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 C17orf102A2RUQ5 167 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 SPDYE3A6NKU9 549 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 SPATA31C2B4DYI2 1134 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 H3BRB1 525 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 PIK3CDO00329 1044 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 FIBPO43427 364 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 BAIAP3O94812 1187 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 MYOGP15173 224 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 ICAM3P32942 547 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 MRPS9P82933 396 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 KRT32Q14532 448 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 CYFIP1Q7L576 1253 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 HEATR3Q7Z4Q2 680 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 MICU3Q86XE3 530 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 GIMAP8Q8ND71 665 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 GPKOWQ92917 476 aaPredicted RBP eCLIP11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 USP26Q9BXU7 913 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 TUT1Q9H6E5 874 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 EHMT1Q9H9B1 1298 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 NAP1L2Q9ULW6 460 aaPredicted RBP11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 MYH7BA7E2Y1 1941 aa11.6□□□□□ -0.55
UBE2D3-227ENST00000508818 hCG_1642624A0A1W2PR95 340 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 HAS3O00219 553 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 GNAT1P11488 350 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 CKBP12277 381 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms