RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 TEPSINQ96N21 525 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 KCNMB3Q9NPA1 279 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 PHF20L1A8MW92 1017 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 SREBF1P36956 1147 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 KRT79Q5XKE5 535 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 HAS1Q92839 578 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 CDK5RAP3Q96JB5 506 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 PLIN2Q99541 437 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 TRIM9Q9C026 710 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 RANBP17Q9H2T7 1088 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 LZTFL1Q9NQ48 299 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 MYO1AQ9UBC5 1043 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 FEM1BQ9UK73 627 aa12.89□□□□□ -0.35
PRPF40B-203ENST00000508736 MYH7BA7E2Y1 1941 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 FANCGO15287 622 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 COBLO75128 1261 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 CCNE1P24864 410 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 CIITAP33076 1130 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 KRT9P35527 623 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 DNM2P50570 870 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 PDE4DQ08499 809 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 GRB10Q13322 594 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 BMS1Q14692 1282 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 Q4G0T1 1027 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 KIAA1755Q5JYT7 1200 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 HYIQ5T013 277 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 SLFN12Q8IYM2 578 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 CSGALNACT2Q8N6G5 542 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 LRRN4CLQ8ND94 238 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 LRRC15Q8TF66 581 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 P2RX5Q93086 422 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 HACL1Q9UJ83 578 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 PCDHA12Q9UN75 941 aa12.88□□□□□ -0.35
PRPF40B-203ENST00000508736 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 PES1O00541 588 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 OPLAHO14841 1288 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 CYP3A4P08684 503 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 TUBB4BP68371 445 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 ARHGAP4P98171 946 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 KIF4BQ2VIQ3 1234 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 FAM83BQ5T0W9 1011 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 GPR161Q8N6U8 529 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 GOLGA1Q92805 767 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 IQCDQ96DY2 449 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 PNMA5Q96PV4 448 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 NUP58Q9BVL2 599 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 DEFB129Q9H1M3 183 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 STK24Q9Y6E0 443 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 CTAGE9A4FU28 777 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 GABPB1Q06547 395 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 TMCO3Q6UWJ1 677 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 IRF2BP1Q8IU81 584 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 RETREG2Q8NC44 543 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 OR8K1Q8NGG5 319 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 LARP4BQ92615 738 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 LPAR1Q92633 364 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 NT5C3AQ9H0P0 336 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 RRAGCQ9HB90 399 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 BLOC1S4Q9NUP1 217 aa12.87□□□□□ -0.35
PRPF40B-203ENST00000508736 PVALEFA0A1B0GWK0 134 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 IQCA1LA6NCM1 817 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 POTEMA6NI47 508 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 POTECB2RU33 542 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 CTNND1O60716 968 aaKnown RBP12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 EPHX2P34913 555 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 CLCN6P51797 869 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 USH1GQ495M9 461 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 CEP112Q8N8E3 955 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 SNX29Q8TEQ0 813 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 RABGGTAQ92696 567 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 P2RX7Q99572 595 aaKnown RBP12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
PRPF40B-203ENST00000508736 WDR46O15213 610 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 MARCH6O60337 910 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 FGFR1OPO95684 399 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 PMS1P54277 932 aaKnown RBP12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 ERVK-24P63145 666 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 DMTNQ08495 405 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 ZNF569Q5MCW4 686 aa12.85□□□□□ -0.35
PRPF40B-203ENST00000508736 KCTD17Q8N5Z5 321 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms