RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 HIC1Q14526 733 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 PTGISQ16647 500 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 DGKDQ16760 1214 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 CELF3Q5SZQ8 465 aaKnown RBP18.75■□□□□ 0.59
LMNA-222ENST00000508500 USP17L6PQ6QN14 398 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 DEFB128Q7Z7B8 93 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 DHX37Q8IY37 1157 aaKnown RBP18.75■□□□□ 0.59
LMNA-222ENST00000508500 RPUSD2Q8IZ73 545 aaKnown RBP18.75■□□□□ 0.59
LMNA-222ENST00000508500 PPTC7Q8NI37 304 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 CTCFLQ8NI51 663 aaPredicted RBP18.75■□□□□ 0.59
LMNA-222ENST00000508500 DHX38Q92620 1227 aaKnown RBP18.75■□□□□ 0.59
LMNA-222ENST00000508500 HDAC6Q9UBN7 1215 aa18.75■□□□□ 0.59
LMNA-222ENST00000508500 PITPNM1O00562 1244 aa18.74■□□□□ 0.59
LMNA-222ENST00000508500 GGPS1O95749 300 aa18.74■□□□□ 0.59
LMNA-222ENST00000508500 F2P00734 622 aa18.74■□□□□ 0.59
LMNA-222ENST00000508500 UBA1P22314 1058 aaKnown RBP18.74■□□□□ 0.59
LMNA-222ENST00000508500 CCND2P30279 289 aa18.74■□□□□ 0.59
LMNA-222ENST00000508500 PSEN2P49810 448 aa18.74■□□□□ 0.59
LMNA-222ENST00000508500 RASEFQ8IZ41 740 aa18.74■□□□□ 0.59
LMNA-222ENST00000508500 TMTC2Q8N394 836 aa18.74■□□□□ 0.59
LMNA-222ENST00000508500 RRP36Q96EU6 259 aaKnown RBP18.74■□□□□ 0.59
LMNA-222ENST00000508500 ALG1Q9BT22 464 aa18.74■□□□□ 0.59
LMNA-222ENST00000508500 GTF2IRD1Q9UHL9 959 aa18.74■□□□□ 0.59
LMNA-222ENST00000508500 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 CCDC69A6NI79 296 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 KIF5BP33176 963 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 RABGGTBP53611 331 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 EXOSC10Q01780 885 aaKnown RBP18.73■□□□□ 0.59
LMNA-222ENST00000508500 ADCK5Q3MIX3 580 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 KCNV1Q6PIU1 500 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 NFXL1Q6ZNB6 911 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 WNT8BQ93098 351 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 C16orf70Q9BSU1 422 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 NKX2-4Q9H2Z4 354 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 TELO2Q9Y4R8 837 aa18.73■□□□□ 0.59
LMNA-222ENST00000508500 TGFB3P10600 412 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 MYOGP15173 224 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 ICAM3P32942 547 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 ZNF200P98182 395 aaPredicted RBP18.72■□□□□ 0.59
LMNA-222ENST00000508500 MFSD10Q14728 455 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 KIAA0753Q2KHM9 967 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 SGMS1Q86VZ5 419 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 TCEANC2Q96MN5 208 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 SPATA33Q96N06 139 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 INPP4AQ96PE3 977 aaPredicted RBP18.72■□□□□ 0.59
LMNA-222ENST00000508500 LZTS2Q9BRK4 669 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 RTEL1Q9NZ71 1219 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 MICAL3Q7RTP6 2002 aa18.72■□□□□ 0.59
LMNA-222ENST00000508500 SPATA31C2B4DYI2 1134 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 PIK3CDO00329 1044 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 PPFIA4O75335 1185 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 PFKMP08237 780 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 RBL2Q08999 1139 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 ADGRE1Q14246 886 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 TRIM71Q2Q1W2 868 aaKnown RBP18.71■□□□□ 0.59
LMNA-222ENST00000508500 TMTC3Q6ZXV5 915 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 CCDC82Q8N4S0 544 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 FANCBQ8NB91 859 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 NEK1Q96PY6 1258 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 PRDM6Q9NQX0 595 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 BRPF3Q9ULD4 1205 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 NOD1Q9Y239 953 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 SLC4A7Q9Y6M7 1214 aa18.71■□□□□ 0.59
LMNA-222ENST00000508500 ZBBXA8MT70 800 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 RFC2P35250 354 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 GNAQP50148 359 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 BFSP2Q13515 415 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 RAB30Q15771 203 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 TCTN1Q2MV58 587 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 TSGA10IPQ3SY00 556 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 TRAF7Q6Q0C0 670 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 RETREG2Q8NC44 543 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 MTIF3Q9H2K0 278 aaKnown RBP18.7■□□□□ 0.58
LMNA-222ENST00000508500 PRDM12Q9H4Q4 367 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 MSRAQ9UJ68 235 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 SIP14410 1827 aa18.7■□□□□ 0.58
LMNA-222ENST00000508500 CDC45O75419 566 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 CALM1P0DP23 149 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 CALM2P0DP24 149 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 CALM3P0DP25 149 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 PCNX4Q63HM2 1172 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 C7orf31Q8N865 590 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 SMARCC2Q8TAQ2 1214 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 CAGE1Q8TC20 777 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 AFAP1L1Q8TED9 768 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 KATNAL1Q9BW62 490 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 MLXIPQ9HAP2 919 aa18.69■□□□□ 0.58
LMNA-222ENST00000508500 SEC63Q9UGP8 760 aaKnown RBP18.69■□□□□ 0.58
LMNA-222ENST00000508500 LOXHD1Q8IVV2 1947 aa18.68■□□□□ 0.58
LMNA-222ENST00000508500 STAM2O75886 525 aa18.68■□□□□ 0.58
LMNA-222ENST00000508500 CKBP12277 381 aa18.68■□□□□ 0.58
LMNA-222ENST00000508500 ATP2A2P16615 1042 aaKnown RBP18.68■□□□□ 0.58
LMNA-222ENST00000508500 FUT2Q10981 343 aa18.68■□□□□ 0.58
LMNA-222ENST00000508500 UBE2SQ16763 222 aa18.68■□□□□ 0.58
LMNA-222ENST00000508500 TJAP1Q5JTD0 557 aa18.68■□□□□ 0.58
LMNA-222ENST00000508500 APOA5Q6Q788 366 aa18.68■□□□□ 0.58
LMNA-222ENST00000508500 CYFIP1Q7L576 1253 aa18.68■□□□□ 0.58
LMNA-222ENST00000508500 MICU3Q86XE3 530 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms