RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 MYCLP12524 364 aaPredicted RBP16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 UBA7P41226 1012 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 NFKBIBQ15653 356 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 MAMDC4Q6UXC1 1216 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 TBC1D5Q92609 795 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 MTMR9Q96QG7 549 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 APBA2Q99767 749 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 ZNF577Q9BSK1 485 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 NT5C3AQ9H0P0 336 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 CUEDC2Q9H467 287 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 MAGEF1Q9HAY2 307 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 DDX49Q9Y6V7 483 aaKnown RBP16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 SMCHD1A6NHR9 2005 aa16.27■□□□□ 0.2
HMGCLL1-208ENST00000508459 IPO5O00410 1097 aaKnown RBP16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 GAS7O60861 476 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 AOC2O75106 756 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 LETM1O95202 739 aaPredicted RBP16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 SFNP31947 248 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 ICAM3P32942 547 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 LACTBP83111 547 aaPredicted RBP16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 KRT76Q01546 638 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 NEDD9Q14511 834 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 KLHL40Q2TBA0 621 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 ZNF792Q3KQV3 632 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 KRT79Q5XKE5 535 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 OLFML2BQ68BL8 750 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 POTEEQ6S8J3 1075 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 CALML4Q96GE6 196 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 TEKT3Q9BXF9 490 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 LRRC27Q9C0I9 530 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 LMBRD1Q9NUN5 540 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 DDX19AQ9NUU7 478 aaKnown RBP16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 RNF186Q9NXI6 227 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 PCDHA7Q9UN72 937 aa16.26■□□□□ 0.19
HMGCLL1-208ENST00000508459 ZNFX1Q9P2E3 1918 aaKnown RBP16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 NFASCO94856 1347 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 IGLV3-22A0A075B6J6 115 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 VWA3AA6NCI4 1184 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 FAM205CA6NFA0 338 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 CTAGE5O15320 804 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 KINO60870 393 aaKnown RBP16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 TDP2O95551 362 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 FAM160A1Q05DH4 1040 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 MORN1Q5T089 497 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 LRCH2Q5VUJ6 765 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 SMAP1Q8IYB5 467 aaPredicted RBP16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 RASSF8Q8NHQ8 419 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 SCFD2Q8WU76 684 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 CDK5RAP3Q96JB5 506 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 PGBD1Q96JS3 809 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 ABHD16BQ9H3Z7 469 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 TTC12Q9H892 705 aaPredicted RBP16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 COL20A1Q9P218 1284 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 LRWD1Q9UFC0 647 aa16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
HMGCLL1-208ENST00000508459 TRPA1O75762 1119 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 MARCKSP29966 332 aaPredicted RBP16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 TXKP42681 527 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 JAK3P52333 1124 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 PPP2R5CQ13362 524 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 TTLL4Q14679 1199 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 RESP18Q5W5W9 173 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 IGSF22Q8N9C0 903 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 IQUBQ8NA54 791 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 ETNPPLQ8TBG4 499 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 SLC5A5Q92911 643 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 TIGD1Q96MW7 591 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 CCSER1Q9C0I3 900 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 KCNH7Q9NS40 1196 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 PLXNA1Q9UIW2 1896 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 CASP8AP2Q9UKL3 1982 aa16.24■□□□□ 0.19
HMGCLL1-208ENST00000508459 FAM237AA0A1B0GTK4 181 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 SPATA31C2B4DYI2 1134 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 FAM86B1E9PN63 330 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 FKTNO75072 461 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 MYL1P05976 194 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 FAM86B2P0C5J1 330 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 PSMC4P43686 418 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 SEMA3FQ13275 785 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 ZNF746Q6NUN9 644 aaPredicted RBP16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 ELOA2Q8IYF1 753 aaPredicted RBP16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 TINF2Q9BSI4 451 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 GTPBP4Q9BZE4 634 aaKnown RBP16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 GDPD2Q9HCC8 539 aa16.23■□□□□ 0.19
HMGCLL1-208ENST00000508459 SOWAHBA6NEL2 793 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 MSH4O15457 936 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 SLC37A4O43826 429 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 ITGB5P18084 799 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 SYKP43405 635 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 MRPS9P82933 396 aaKnown RBP16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 AMPD3Q01432 767 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 CNTN2Q02246 1040 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 NBR1Q14596 966 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 BRDTQ58F21 947 aaPredicted RBP16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 AXDND1Q5T1B0 1012 aaPredicted RBP16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 MFSD14CQ5VZR4 134 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
HMGCLL1-208ENST00000508459 FSIP1Q8NA03 581 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms