RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 LAD1O00515 517 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 DUSP11O75319 330 aaKnown RBP11.63□□□□□ -0.55
HTT-204ENST00000508321 RGS20O76081 388 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 FAM86B2P0C5J1 330 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 ZSCAN22P10073 491 aaPredicted RBP11.63□□□□□ -0.55
HTT-204ENST00000508321 RARBP10826 455 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 TNFAIP2Q03169 654 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 RESTQ13127 1097 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 LETM2Q2VYF4 491 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 TTC38Q5R3I4 469 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 SEPT14Q6ZU15 432 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 EEPD1Q7L9B9 569 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 WDR11Q9BZH6 1224 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 DDX25Q9UHL0 483 aaKnown RBP11.63□□□□□ -0.55
HTT-204ENST00000508321 TCEAL9Q9UHQ7 104 aa11.63□□□□□ -0.55
HTT-204ENST00000508321 DOCK5Q9H7D0 1870 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 NEMFO60524 1076 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 CCNT1O60563 726 aaKnown RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 TDP2O95551 362 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 BRD1O95696 1058 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 F13A1P00488 732 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 TXNP10599 105 aaKnown RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 CCL5P13501 91 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 UBA1P22314 1058 aaKnown RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 CCND3P30281 292 aaPredicted RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 DDIT3P35638 169 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 ADCYAP1R1P41586 468 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 NKX3-2P78367 333 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 TRIM32Q13049 653 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 PRR16Q569H4 304 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 BRDTQ58F21 947 aaPredicted RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 EARS2Q5JPH6 523 aaKnown RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 MYSM1Q5VVJ2 828 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 ATL3Q6DD88 541 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 CCDC62Q6P9F0 684 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 METTL7BQ6UX53 244 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 TLK2Q86UE8 772 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 PLA2G4DQ86XP0 818 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 SPRYD3Q8NCJ5 442 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 TRPV1Q8NER1 839 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 LENG9Q96B70 501 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 FAM20AQ96MK3 541 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 IPO9Q96P70 1041 aaKnown RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 RIT2Q99578 217 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 SDF4Q9BRK5 362 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 UPF3AQ9H1J1 476 aaKnown RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 SPC25Q9HBM1 224 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 KCNH7Q9NS40 1196 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 TBC1D22BQ9NU19 505 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 PCDH10Q9P2E7 1040 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 DDX41Q9UJV9 622 aaKnown RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 CEP131Q9UPN4 1083 aa11.62□□□□□ -0.55
HTT-204ENST00000508321 GNEQ9Y223 722 aaKnown RBP11.62□□□□□ -0.55
HTT-204ENST00000508321 FAM205CA6NFA0 338 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 IPO5O00410 1097 aaKnown RBP11.61□□□□□ -0.55
HTT-204ENST00000508321 GH1P01241 217 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 GJB1P08034 283 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 KCNA2P16389 499 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 CST5P28325 142 aaPredicted RBP11.61□□□□□ -0.55
HTT-204ENST00000508321 CNGA1P29973 690 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 CPT1AP50416 773 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 SEMA3FQ13275 785 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 LAMC2Q13753 1193 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 ZNF577Q9BSK1 485 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 RNF208Q9H0X6 261 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 UNC93B1Q9H1C4 597 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 AGO4Q9HCK5 861 aaKnown RBP11.61□□□□□ -0.55
HTT-204ENST00000508321 JPH1Q9HDC5 661 aaPredicted RBP11.61□□□□□ -0.55
HTT-204ENST00000508321 RTEL1Q9NZ71 1219 aa11.61□□□□□ -0.55
HTT-204ENST00000508321 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
HTT-204ENST00000508321 MORC2Q9Y6X9 1032 aaPredicted RBP11.61□□□□□ -0.55
HTT-204ENST00000508321 SYNRGQ9UMZ2 1314 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 WDR81Q562E7 1941 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 SLC37A4O43826 429 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 ZEB2O60315 1214 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 ARIH2O95376 493 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 BAG4O95429 457 aaKnown RBP11.6□□□□□ -0.55
HTT-204ENST00000508321 SMPD1P17405 629 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 PRPHP41219 470 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 GJA9P57773 515 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 KRT76Q01546 638 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 CALCRLQ16602 461 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 PRAMEF19Q5SWL8 479 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 CELF3Q5SZQ8 465 aaKnown RBP11.6□□□□□ -0.55
HTT-204ENST00000508321 FERMT3Q86UX7 667 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 SMAP1Q8IYB5 467 aaPredicted RBP11.6□□□□□ -0.55
HTT-204ENST00000508321 ANKLE1Q8NAG6 615 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 RDM1Q8NG50 284 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 PPTC7Q8NI37 304 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 ETNPPLQ8TBG4 499 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 SLC5A5Q92911 643 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 ZNF396Q96N95 335 aaPredicted RBP11.6□□□□□ -0.55
HTT-204ENST00000508321 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 AP5M1Q9H0R1 490 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 KCNMB3Q9NPA1 279 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 XPNPEP3Q9NQH7 507 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 PDGFCQ9NRA1 345 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 CENPFP49454 3210 aa11.6□□□□□ -0.55
HTT-204ENST00000508321 LOXHD1Q8IVV2 1947 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms