RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 PTPN21Q16825 1174 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 HABP4Q5JVS0 413 aaKnown RBP5.38□□□□□ -1.55
USP53-204ENST00000507906 ANGEL2Q5VTE6 544 aaKnown RBP5.38□□□□□ -1.55
USP53-204ENST00000507906 BROXQ5VW32 411 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 CEP68Q76N32 757 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 WAPLQ7Z5K2 1190 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 ZBTB46Q86UZ6 589 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 PTRH1Q86Y79 214 aaKnown RBP5.38□□□□□ -1.55
USP53-204ENST00000507906 CERS3Q8IU89 383 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 PASD1Q8IV76 773 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 TEX2Q8IWB9 1127 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 MYO1HQ8N1T3 1032 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 C2orf69Q8N8R5 385 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 JPH3Q8WXH2 748 aaPredicted RBP5.38□□□□□ -1.55
USP53-204ENST00000507906 CHAMP1Q96JM3 812 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 DBNDD2Q9BQY9 259 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 POLR3GLQ9BT43 218 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 MENTQ9BUN1 341 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 ZC3H7BQ9UGR2 993 aaKnown RBP5.38□□□□□ -1.55
USP53-204ENST00000507906 ZNF180Q9UJW8 692 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 ZKSCAN5Q9Y2L8 839 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 PCDHGA9Q9Y5G4 932 aaKnown RBP5.38□□□□□ -1.55
USP53-204ENST00000507906 PCDHGA8Q9Y5G5 932 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 PCDHGA7Q9Y5G6 932 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 PCDHGA6Q9Y5G7 932 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 PCDHGA3Q9Y5H0 932 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 PCDHGA2Q9Y5H1 932 aa5.38□□□□□ -1.55
USP53-204ENST00000507906 PRR19A6NJB7 356 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 MAN2B1O00754 1011 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 KRT37O76014 449 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 EFEMP2O95967 443 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 MYBL2P10244 700 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 ZSCAN20P17040 1043 aaPredicted RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 KRT15P19012 456 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 HOXA10P31260 410 aaPredicted RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 CLCN7P51798 805 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 KPNA1P52294 538 aaPredicted RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 RPL11P62913 178 aaKnown RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 ST5P78524 1137 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 KIR3DS1Q14943 382 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 FAM47CQ5HY64 1035 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 ARHGAP36Q6ZRI8 547 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 HDGFL2Q7Z4V5 671 aaPredicted RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 TPH2Q8IWU9 490 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 RBM12BQ8IXT5 1001 aaKnown RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 PLEKHO2Q8TD55 490 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 PMM1Q92871 262 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 SLC5A5Q92911 643 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 SLC39A13Q96H72 371 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 AHCYL2Q96HN2 611 aaKnown RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 HHIPL1Q96JK4 782 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 JMJD8Q96S16 334 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 ELF4Q99607 663 aaPredicted RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 MTA3Q9BTC8 594 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 KRTAP9-2Q9BYQ4 174 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 CHST12Q9NRB3 414 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 TOPORSQ9NS56 1045 aaPredicted RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 C14orf119Q9NWQ9 140 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 GEMIN8Q9NWZ8 242 aaKnown RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 IP6K2Q9UHH9 426 aa5.37□□□□□ -1.55
USP53-204ENST00000507906 ARID4BQ4LE39 1312 aaPredicted RBP5.37□□□□□ -1.55
USP53-204ENST00000507906 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.36□□□□□ -1.55
USP53-204ENST00000507906 TBC1D8O95759 1140 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 PTX3P26022 381 aaPredicted RBP5.36□□□□□ -1.55
USP53-204ENST00000507906 SMAD3P84022 425 aaKnown RBP5.36□□□□□ -1.55
USP53-204ENST00000507906 KLF1Q13351 362 aaPredicted RBP5.36□□□□□ -1.55
USP53-204ENST00000507906 PDCD1Q15116 288 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 TERF2Q15554 542 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 SMAD2Q15796 467 aaKnown RBP5.36□□□□□ -1.55
USP53-204ENST00000507906 FAM102BQ5T8I3 360 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 ARHGAP27Q6ZUM4 889 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 TMPRSS7Q7RTY8 843 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 ZDHHC13Q8IUH4 622 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 NOSTRINQ8IVI9 506 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 Q8N1Y9 231 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 NAT16Q8N8M0 369 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 PIP4K2CQ8TBX8 421 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 FAXDC2Q96IV6 333 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 OSBPL1AQ9BXW6 950 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 ATG3Q9NT62 314 aa5.36□□□□□ -1.55
USP53-204ENST00000507906 LUC7L2Q9Y383 392 aaKnown RBP5.36□□□□□ -1.55
USP53-204ENST00000507906 TRBV23OR9-2A0A075B6M9 112 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 KRTAP9-6A0A140TA67 174 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 FADS2P1A8MWK0 482 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 C22orf46C9J442 243 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 MYO1BO43795 1136 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 NPHS1O60500 1241 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 H2AFYO75367 372 aaKnown RBP5.35□□□□□ -1.55
USP53-204ENST00000507906 IGLV1-40P01703 118 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 FUCA1P04066 466 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 MSL3P1P0C860 447 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 ATF3P18847 181 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 FSTP19883 344 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 SCAND1P57086 179 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 TCIRG1Q13488 830 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 GPR19Q15760 415 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 CRY1Q16526 586 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 DDB1Q16531 1140 aa5.35□□□□□ -1.55
USP53-204ENST00000507906 IFI16Q16666 785 aaKnown RBP5.35□□□□□ -1.55
USP53-204ENST00000507906 CPZQ66K79 652 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms