RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 PPM1GO15355 546 aaPredicted RBP6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 CELA3BP08861 270 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 NKX3-2P78367 333 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 CHRNA2Q15822 529 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 PRAMEF18Q5VWM3 479 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 CKAP2LQ8IYA6 745 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 SREK1Q8WXA9 508 aaKnown RBP6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 CPA5Q8WXQ8 436 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 DRC1Q96MC2 740 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 ZSWIM3Q96MP5 696 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 KCNJ15Q99712 375 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 EPN3Q9H201 632 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 RTEL1Q9NZ71 1219 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 PCDHB4Q9Y5E5 795 aa6.12□□□□□ -1.43
CALCOCO2-208ENST00000506971 BLACEA4D250 179 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 IQCA1LA6NCM1 817 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 SCG5P05408 212 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 NAALADL2Q58DX5 795 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 ACBD5Q5T8D3 534 aaPredicted RBP6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 MCTP2Q6DN12 878 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 DENND5AQ6IQ26 1287 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 SLC43A3Q8NBI5 491 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 AARSD1Q9BTE6 412 aaKnown RBP6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 C11orf84Q9BUA3 381 aaPredicted RBP6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 PHF20Q9BVI0 1012 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 CROTQ9UKG9 612 aa6.11□□□□□ -1.43
CALCOCO2-208ENST00000506971 CECR2Q9BXF3 1484 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 H7BY64 318 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 CNR2P34972 360 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 HTRA3P83110 453 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 RTP5Q14D33 572 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 NSMFQ6X4W1 530 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 FRMD5Q7Z6J6 570 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 RIOX2Q8IUF8 465 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 ARRDC4Q8NCT1 418 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 TANGO6Q9C0B7 1094 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 EPB41L1Q9H4G0 881 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 SPATA6Q9NWH7 488 aaPredicted RBP6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 PFDN2Q9UHV9 154 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 X6R8D5 127 aa6.1□□□□□ -1.43
CALCOCO2-208ENST00000506971 KRIT1O00522 736 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 DDX3XO00571 662 aaKnown RBP eCLIP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 PRICKLE3O43900 615 aaPredicted RBP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 DLX3O60479 287 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 MSCO60682 206 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 CYP1A1P04798 512 aaPredicted RBP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 ATP2B1P20020 1258 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 GTF2F1P35269 517 aaKnown RBP eCLIP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 SLC6A11P48066 632 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 ZC3H6P61129 1189 aaKnown RBP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 GRIN1Q05586 938 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 IFRD2Q12894 506 aaPredicted RBP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 KCNT2Q6UVM3 1135 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 PRRT2Q7Z6L0 340 aaPredicted RBP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 FAM126BQ8IXS8 530 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 RBM12BQ8IXT5 1001 aaKnown RBP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 KYQ8NBH2 561 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 TOE1Q96GM8 510 aaKnown RBP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 TEPSINQ96N21 525 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 IPO9Q96P70 1041 aaKnown RBP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 CDC6Q99741 560 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 MYOTQ9UBF9 498 aa6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 PPARGC1AQ9UBK2 798 aaKnown RBP6.09□□□□□ -1.43
CALCOCO2-208ENST00000506971 ZNF536O15090 1300 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 TRAV20A0A0B4J274 112 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 SH3D21A4FU49 640 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 SLC27A2O14975 620 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 KLF4O43474 513 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 MAFKO60675 156 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 COL6A2P12110 1019 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 NCLP19338 710 aaKnown RBP6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 MAP4K2Q12851 820 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 RAB33AQ14088 237 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 RGL3Q3MIN7 710 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 SLC35F1Q5T1Q4 408 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 TMC5Q6UXY8 1006 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 FAM124AQ86V42 546 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 TTLL6Q8N841 843 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 CXorf38Q8TB03 319 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 PIP4K2CQ8TBX8 421 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 ADAMTS17Q8TE56 1095 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 PCDH18Q9HCL0 1135 aa6.08□□□□□ -1.44
CALCOCO2-208ENST00000506971 GNAT1P11488 350 aa6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 PABPC1P11940 636 aaKnown RBP6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 ITGA1P56199 1179 aa6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 CAP1Q01518 475 aa6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 DLX2Q07687 328 aaPredicted RBP6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 MTERF2Q49AM1 385 aa6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 YOD1Q5VVQ6 348 aaPredicted RBP6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 ZNF761Q86XN6 746 aaPredicted RBP6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 MIB1Q86YT6 1006 aa6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 LRRC47Q8N1G4 583 aaKnown RBP6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 C1orf159Q96HA4 380 aa6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 CLIC6Q96NY7 704 aa6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 L2HGDHQ9H9P8 463 aa6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 NGRNQ9NPE2 291 aaKnown RBP6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 EEA1Q15075 1411 aa6.07□□□□□ -1.44
CALCOCO2-208ENST00000506971 SMARCA2P51531 1590 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms