RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 RUFY2Q8WXA3 655 aa13.15□□□□□ -0.3
CCHCR1-220ENST00000506831 HLA-CQ95604 372 aa13.15□□□□□ -0.3
CCHCR1-220ENST00000506831 MTMR8Q96EF0 704 aa13.15□□□□□ -0.3
CCHCR1-220ENST00000506831 HDAC6Q9UBN7 1215 aa13.15□□□□□ -0.3
CCHCR1-220ENST00000506831 MRVI1Q9Y6F6 885 aa13.15□□□□□ -0.3
CCHCR1-220ENST00000506831 SGSM2O43147 1006 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 NBNO60934 754 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 GJB5O95377 273 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 CFBP00751 764 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 TGFB3P10600 412 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 KCNQ1P51787 676 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 TRAF1Q13077 416 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 IKBKEQ14164 716 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 MFSD10Q14728 455 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 KIAA0753Q2KHM9 967 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 STOX1Q6ZVD7 989 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 VSIG10LQ86VR7 867 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 RAD9AQ99638 391 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 PDCD2LQ9BRP1 358 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 ESYT1Q9BSJ8 1104 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 UBAC1Q9BSL1 405 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 ZBED2Q9BTP6 218 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 IL25Q9H293 177 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 VAT1LQ9HCJ6 419 aa13.14□□□□□ -0.31
CCHCR1-220ENST00000506831 OPLAHO14841 1288 aa13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 ZBTB5O15062 677 aa13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 ERVK-21P61565 698 aa13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 IFIT1BQ5T764 474 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 NECAB3Q96P71 396 aaPredicted RBP13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 TGS1Q96RS0 853 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
CCHCR1-220ENST00000506831 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
CCHCR1-220ENST00000506831 RGS20O76081 388 aa13.12□□□□□ -0.31
CCHCR1-220ENST00000506831 DEFB103AP81534 67 aa13.12□□□□□ -0.31
CCHCR1-220ENST00000506831 SEC23AQ15436 765 aa13.12□□□□□ -0.31
CCHCR1-220ENST00000506831 CELF3Q5SZQ8 465 aaKnown RBP13.12□□□□□ -0.31
CCHCR1-220ENST00000506831 KRT40Q6A162 431 aa13.12□□□□□ -0.31
CCHCR1-220ENST00000506831 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
CCHCR1-220ENST00000506831 ARIH1Q9Y4X5 557 aaPredicted RBP13.12□□□□□ -0.31
CCHCR1-220ENST00000506831 LCHNA4D1U4 455 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 LGR5O75473 907 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 PGM5Q15124 567 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 HSDL1Q3SXM5 330 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 ZNF618Q5T7W0 954 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 SERINC5Q86VE9 423 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 STAG2Q8N3U4 1231 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 SPATA33Q96N06 139 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 RIOX1Q9H6W3 641 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 SUGCTQ9HAC7 445 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 MAD2L2Q9UI95 211 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 INSL6Q9Y581 213 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
CCHCR1-220ENST00000506831 BAZ2BQ9UIF8 2168 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 LINC01553A4QN01 128 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 PPP1R11O60927 126 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 STAM2O75886 525 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 GGPS1O95749 300 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 ZNF286BP0CG31 522 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 MYCLP12524 364 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 HOXC8P31273 242 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 MBTPS1Q14703 1052 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 C8orf34Q49A92 452 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 C16orf70Q9BSU1 422 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 SIP14410 1827 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 MICAL3Q7RTP6 2002 aa13.1□□□□□ -0.31
CCHCR1-220ENST00000506831 COL4A4P53420 1690 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 RSPH10B2B2RC85 870 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 GCOM1H8Y6P7 765 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 CAND2O75155 1236 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 RSPH10BP0C881 870 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 POLR2MP0CAP2 368 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 CCND2P30279 289 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 PLA2G5P39877 138 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 HTRA4P83105 476 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 SP2Q02086 613 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 TRDNQ13061 729 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 TCTN1Q2MV58 587 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 PLEKHG4Q58EX7 1191 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 TMCO2Q7Z6W1 182 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 WNT8BQ93098 351 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 SAMD11Q96NU1 681 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 MLXIPQ9HAP2 919 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 ANO2Q9NQ90 1003 aa13.09□□□□□ -0.31
CCHCR1-220ENST00000506831 C17orf102A2RUQ5 167 aa13.08□□□□□ -0.32
CCHCR1-220ENST00000506831 H3BRB1 525 aa13.08□□□□□ -0.32
CCHCR1-220ENST00000506831 AMHP03971 560 aa13.08□□□□□ -0.32
CCHCR1-220ENST00000506831 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-220ENST00000506831 ICAM3P32942 547 aa13.08□□□□□ -0.32
CCHCR1-220ENST00000506831 ZNF200P98182 395 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-220ENST00000506831 PTH1RQ03431 593 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms