RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 GNPTABQ3T906 1256 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 TRIM60Q495X7 471 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 C1orf53Q5VUE5 145 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 KCNV1Q6PIU1 500 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 AFG1LQ8WV93 481 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 CRYGNQ8WXF5 182 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 EMID1Q96A84 441 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 BCAS3Q9H6U6 928 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 EHMT1Q9H9B1 1298 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 GJB4Q9NTQ9 266 aa20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 ORC3Q9UBD5 711 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-216ENST00000506537 MYH7BA7E2Y1 1941 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 ELP1O95163 1332 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 H0YGN5 161 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 FIBPO43427 364 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 GGPS1O95749 300 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 MMP3P08254 477 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 TGFB3P10600 412 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 NLRP5P59047 1200 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 PURAQ00577 322 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 GLT1D1Q96MS3 346 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 ATP11BQ9Y2G3 1177 aa20.86■□□□□ 0.93
PDLIM7-216ENST00000506537 GRIN2DO15399 1336 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 ZEB2O60315 1214 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 ARHGAP4P98171 946 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 CELF3Q5SZQ8 465 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 MYSM1Q5VVJ2 828 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 CCDC83Q8IWF9 413 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 CYP2W1Q8TAV3 490 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 BICD2Q8TD16 824 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 GPRASP2Q96D09 838 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 KCNJ14Q9UNX9 436 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 SCN10AQ9Y5Y9 1956 aa20.85■□□□□ 0.93
PDLIM7-216ENST00000506537 M0R2N6 131 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 MYL3P08590 195 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 PSMC6P62333 389 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 NLRX1Q86UT6 975 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 DHX37Q8IY37 1157 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 FAM177A1Q8N128 213 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 DAGLBQ8NCG7 672 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 ZSCAN31Q96LW9 406 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 PHF20Q9BVI0 1012 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 JADE2Q9NQC1 790 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 POLR3EQ9NVU0 708 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 ZMYND8Q9ULU4 1186 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 PCDHA4Q9UN74 947 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 NR2E3Q9Y5X4 410 aa20.84■□□□□ 0.93
PDLIM7-216ENST00000506537 A0A0U1RQG5 324 aaPredicted RBP20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 ATP9AO75110 1047 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 CABYRO75952 493 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 CDK7P50613 346 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 TLE2Q04725 743 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 LAMC2Q13753 1193 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 HSDL1Q3SXM5 330 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 PPTC7Q8NI37 304 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 MXRA8Q9BRK3 442 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 ALG1Q9BT22 464 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 SH2B1Q9NRF2 756 aaPredicted RBP20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 TELO2Q9Y4R8 837 aa20.83■□□□□ 0.93
PDLIM7-216ENST00000506537 EDIL3O43854 480 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 ST18O60284 1047 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 CYP3A4P08684 503 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 HOXD8P13378 290 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 KCNA2P16389 499 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 MTMR1Q13613 665 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 CEP55Q53EZ4 464 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 BRDTQ58F21 947 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 MCTP2Q6DN12 878 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 BLIDQ8IZY5 108 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 SLC43A3Q8NBI5 491 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 VTI1AQ96AJ9 217 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 SPATA33Q96N06 139 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 SENP7Q9BQF6 1050 aa20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 MTG1Q9BT17 334 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-216ENST00000506537 FAM86B1E9PN63 330 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 ARVCFO00192 962 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 PQBP1O60828 265 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 FAM86B2P0C5J1 330 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 SYN1P17600 705 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 NEDD9Q14511 834 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 METTL7BQ6UX53 244 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 CYFIP1Q7L576 1253 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 ANKRD33Q7Z3H0 272 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 WASF1Q92558 559 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 PDLIM7Q9NR12 457 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 PKD2L1Q9P0L9 805 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 LTBP2Q14767 1821 aa20.81■□□□□ 0.92
PDLIM7-216ENST00000506537 IGLV3-22A0A075B6J6 115 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 MEIS1O00470 390 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 KPNA6O60684 536 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 ARP10275 920 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 ITGA7Q13683 1181 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 GALNT17Q6IS24 598 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 OXER1Q8TDS5 423 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 PPP1R13LQ8WUF5 828 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 KAT2BQ92831 832 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 CDHR1Q96JP9 859 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 LLPHQ9BRT6 129 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 MLXIPQ9HAP2 919 aa20.8■□□□□ 0.92
PDLIM7-216ENST00000506537 KCNH7Q9NS40 1196 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms