RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 GPKOWQ92917 476 aaPredicted RBP eCLIP14.16□□□□□ -0.14
SNHG4-202ENST00000505522 SPATA33Q96N06 139 aa14.16□□□□□ -0.14
SNHG4-202ENST00000505522 CERS4Q9HA82 394 aa14.16□□□□□ -0.14
SNHG4-202ENST00000505522 THEGQ9P2T0 379 aa14.16□□□□□ -0.14
SNHG4-202ENST00000505522 PTPRSQ13332 1948 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 PNMA6FA0A0J9YX94 578 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 EPOPA6NHQ4 379 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 NBNO60934 754 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 BAIAP3O94812 1187 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 GGPS1O95749 300 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 UBA1P22314 1058 aaKnown RBP14.15□□□□□ -0.14
SNHG4-202ENST00000505522 CCND2P30279 289 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 ZNF200P98182 395 aaPredicted RBP14.15□□□□□ -0.14
SNHG4-202ENST00000505522 TAP1Q03518 808 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 RBL2Q08999 1139 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 HIC1Q14526 733 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 TCTN1Q2MV58 587 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 HSDL1Q3SXM5 330 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 KCNV1Q6PIU1 500 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 LRRC8DQ7L1W4 858 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 FCHSD1Q86WN1 690 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 MB21D2Q8IYB1 491 aaPredicted RBP14.15□□□□□ -0.14
SNHG4-202ENST00000505522 MICALL1Q8N3F8 863 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 ATXN2LQ8WWM7 1075 aaKnown RBP14.15□□□□□ -0.14
SNHG4-202ENST00000505522 PIBF1Q8WXW3 757 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 MAP4K1Q92918 833 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 WNT8BQ93098 351 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 KATNAL1Q9BW62 490 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 BCAS3Q9H6U6 928 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 MUC3AQ02505 3323 aa14.15□□□□□ -0.14
SNHG4-202ENST00000505522 MYO9BQ13459 2157 aa14.15□□□□□ -0.15
SNHG4-202ENST00000505522 XIRP2A4UGR9 3374 aa14.14□□□□□ -0.15
SNHG4-202ENST00000505522 PPFIA4O75335 1185 aa14.14□□□□□ -0.15
SNHG4-202ENST00000505522 CXCL10P02778 98 aa14.14□□□□□ -0.15
SNHG4-202ENST00000505522 WDR5P61964 334 aaKnown RBP14.14□□□□□ -0.15
SNHG4-202ENST00000505522 TRAF1Q13077 416 aa14.14□□□□□ -0.15
SNHG4-202ENST00000505522 PTK7Q13308 1070 aa14.14□□□□□ -0.15
SNHG4-202ENST00000505522 SART3Q15020 963 aaKnown RBP14.14□□□□□ -0.15
SNHG4-202ENST00000505522 TRIM71Q2Q1W2 868 aaKnown RBP14.14□□□□□ -0.15
SNHG4-202ENST00000505522 SPRED2Q7Z698 418 aa14.14□□□□□ -0.15
SNHG4-202ENST00000505522 TMCO2Q7Z6W1 182 aaPredicted RBP14.14□□□□□ -0.15
SNHG4-202ENST00000505522 CATIPQ7Z7H3 387 aa14.14□□□□□ -0.15
SNHG4-202ENST00000505522 ASB2Q96Q27 587 aa14.14□□□□□ -0.15
SNHG4-202ENST00000505522 RBM8AQ9Y5S9 174 aaKnown RBP14.14□□□□□ -0.15
SNHG4-202ENST00000505522 BAZ2BQ9UIF8 2168 aaKnown RBP14.14□□□□□ -0.15
SNHG4-202ENST00000505522 TGFB3P10600 412 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 KCNJ6P48051 423 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 DEFB103AP81534 67 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 MRPS9P82933 396 aaKnown RBP14.13□□□□□ -0.15
SNHG4-202ENST00000505522 ZNF618Q5T7W0 954 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 CNKSR3Q6P9H4 555 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 TRAF7Q6Q0C0 670 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 C16orf70Q9BSU1 422 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 MYL10Q9BUA6 226 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 LY9Q9HBG7 655 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 MTCH2Q9Y6C9 303 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 FRMPD4Q14CM0 1322 aa14.13□□□□□ -0.15
SNHG4-202ENST00000505522 LCHNA4D1U4 455 aa14.12□□□□□ -0.15
SNHG4-202ENST00000505522 KIF28PB7ZC32 967 aa14.12□□□□□ -0.15
SNHG4-202ENST00000505522 TLL1O43897 1013 aa14.12□□□□□ -0.15
SNHG4-202ENST00000505522 PARNO95453 639 aaKnown RBP14.12□□□□□ -0.15
SNHG4-202ENST00000505522 POU3F3P20264 500 aaPredicted RBP14.12□□□□□ -0.15
SNHG4-202ENST00000505522 MRPS5P82675 430 aaKnown RBP14.12□□□□□ -0.15
SNHG4-202ENST00000505522 COL9A3Q14050 684 aaPredicted RBP14.12□□□□□ -0.15
SNHG4-202ENST00000505522 MBTPS1Q14703 1052 aa14.12□□□□□ -0.15
SNHG4-202ENST00000505522 KRT40Q6A162 431 aa14.12□□□□□ -0.15
SNHG4-202ENST00000505522 ZNF654Q8IZM8 581 aa14.12□□□□□ -0.15
SNHG4-202ENST00000505522 ARNTL2Q8WYA1 636 aa14.12□□□□□ -0.15
SNHG4-202ENST00000505522 MLXIPQ9HAP2 919 aa14.12□□□□□ -0.15
SNHG4-202ENST00000505522 TNFRSF10AO00220 468 aa14.11□□□□□ -0.15
SNHG4-202ENST00000505522 SEMA3FQ13275 785 aa14.11□□□□□ -0.15
SNHG4-202ENST00000505522 INPP4AQ96PE3 977 aaPredicted RBP14.11□□□□□ -0.15
SNHG4-202ENST00000505522 SPZ1Q9BXG8 430 aa14.11□□□□□ -0.15
SNHG4-202ENST00000505522 RTEL1Q9NZ71 1219 aa14.11□□□□□ -0.15
SNHG4-202ENST00000505522 ABHD14A-ACY1A0A1B0GW23 586 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 SPATA31C2B4DYI2 1134 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 H3BRB1 525 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 PRC1O43663 620 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 DDAH1O94760 285 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 PLEKHA8P1O95397 391 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 LGALS2P05162 132 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 ICAM3P32942 547 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 TFF2Q03403 129 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 GNPTABQ3T906 1256 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 USP17L6PQ6QN14 398 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 CYFIP1Q7L576 1253 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 SERINC5Q86VE9 423 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 ADAMTS19Q8TE59 1207 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 RRP36Q96EU6 259 aaKnown RBP14.1□□□□□ -0.15
SNHG4-202ENST00000505522 MAP3K14Q99558 947 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 ZBED2Q9BTP6 218 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 LSG1Q9H089 658 aaKnown RBP14.1□□□□□ -0.15
SNHG4-202ENST00000505522 TUT1Q9H6E5 874 aaKnown RBP14.1□□□□□ -0.15
SNHG4-202ENST00000505522 TELO2Q9Y4R8 837 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 DOCK5Q9H7D0 1870 aa14.1□□□□□ -0.15
SNHG4-202ENST00000505522 C17orf102A2RUQ5 167 aa14.09□□□□□ -0.15
SNHG4-202ENST00000505522 SH2B2O14492 632 aaPredicted RBP14.09□□□□□ -0.15
SNHG4-202ENST00000505522 MEIS2O14770 477 aa14.09□□□□□ -0.15
SNHG4-202ENST00000505522 GTPBP6O43824 516 aaPredicted RBP14.09□□□□□ -0.15
SNHG4-202ENST00000505522 LPXNO60711 386 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms