RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 hCG_1984214I3L0E3 225 aa18.83■□□□□ 0.61
LIN54-204ENST00000505397 TECP42680 631 aa18.83■□□□□ 0.61
LIN54-204ENST00000505397 CCDC96Q2M329 555 aa18.83■□□□□ 0.61
LIN54-204ENST00000505397 KIAA1328Q86T90 577 aa18.83■□□□□ 0.61
LIN54-204ENST00000505397 ZNF713Q8N859 430 aaPredicted RBP18.83■□□□□ 0.61
LIN54-204ENST00000505397 MTMR9Q96QG7 549 aa18.83■□□□□ 0.61
LIN54-204ENST00000505397 RIOX1Q9H6W3 641 aa18.83■□□□□ 0.61
LIN54-204ENST00000505397 VIPAS39Q9H9C1 493 aa18.83■□□□□ 0.61
LIN54-204ENST00000505397 FER1L6Q2WGJ9 1857 aa18.83■□□□□ 0.6
LIN54-204ENST00000505397 LRRIQ3A6PVS8 624 aaPredicted RBP18.83■□□□□ 0.6
LIN54-204ENST00000505397 TULP2O00295 520 aa18.83■□□□□ 0.6
LIN54-204ENST00000505397 NKRFO15226 690 aaKnown RBP eCLIP18.83■□□□□ 0.63e-9■■□□□ 13.5
LIN54-204ENST00000505397 N4BP1O75113 896 aaKnown RBP18.83■□□□□ 0.6
LIN54-204ENST00000505397 ZNF543Q08ER8 600 aa18.83■□□□□ 0.6
LIN54-204ENST00000505397 GPATCH4Q5T3I0 446 aaKnown RBP18.83■□□□□ 0.6
LIN54-204ENST00000505397 TBCKQ8TEA7 893 aa18.83■□□□□ 0.6
LIN54-204ENST00000505397 JDP2Q8WYK2 163 aa18.83■□□□□ 0.6
LIN54-204ENST00000505397 KANSL2Q9H9L4 492 aa18.83■□□□□ 0.6
LIN54-204ENST00000505397 GPCPD1Q9NPB8 672 aa18.83■□□□□ 0.6
LIN54-204ENST00000505397 TATDN1Q6P1N9 297 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 TMEM179Q6ZVK1 233 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 AGBL3Q8NEM8 1001 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 EEF2KMTQ96G04 330 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 GMLQ99445 158 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 BLOC1S4Q9NUP1 217 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 CLRN2A0PK11 232 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 TCP10L2B9ZVM9 353 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 RAD21O60216 631 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 SRGAP2O75044 1071 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 MTIF2P46199 727 aaKnown RBP18.82■□□□□ 0.6
LIN54-204ENST00000505397 VPS18Q9P253 973 aa18.82■□□□□ 0.6
LIN54-204ENST00000505397 MCM3P25205 808 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 VAV2P52735 878 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 CKAP4Q07065 602 aaKnown RBP18.81■□□□□ 0.6
LIN54-204ENST00000505397 GRB10Q13322 594 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 R3HDM1Q15032 1099 aaKnown RBP18.81■□□□□ 0.6
LIN54-204ENST00000505397 POTEDQ86YR6 584 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 FAM71BQ8TC56 605 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 PLAGL2Q9UPG8 496 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 ABCB11O95342 1321 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 PVALEFA0A1B0GWK0 134 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 ZNF263O14978 683 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 FXR2P51116 673 aaKnown RBP eCLIP18.81■□□□□ 0.6
LIN54-204ENST00000505397 ICA1Q05084 483 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 ABCB5Q2M3G0 1257 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 CALML4Q96GE6 196 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 NYAP2Q9P242 653 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 SIK3Q9Y2K2 1263 aa18.81■□□□□ 0.6
LIN54-204ENST00000505397 EDIL3O43854 480 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 EEF2P13639 858 aaKnown RBP18.8■□□□□ 0.6
LIN54-204ENST00000505397 PNMA5Q96PV4 448 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 MED4Q9NPJ6 270 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 ZNF70Q9UC06 446 aaPredicted RBP18.8■□□□□ 0.6
LIN54-204ENST00000505397 STK17AQ9UEE5 414 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 GDF11O95390 407 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 LCA5LO95447 670 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 AARSP49588 968 aaKnown RBP eCLIP18.8■□□□□ 0.6
LIN54-204ENST00000505397 ZSCAN26Q16670 478 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 FKBP15Q5T1M5 1219 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 UNC13DQ70J99 1090 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 SV2BQ7L1I2 683 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 REXO1Q8N1G1 1221 aaKnown RBP18.8■□□□□ 0.6
LIN54-204ENST00000505397 GOLGA5Q8TBA6 731 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 TSGA10Q9BZW7 698 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 HERC5Q9UII4 1024 aaKnown RBP18.8■□□□□ 0.6
LIN54-204ENST00000505397 FAN1Q9Y2M0 1017 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 DUSP10Q9Y6W6 482 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 IPO7O95373 1038 aaKnown RBP18.8■□□□□ 0.6
LIN54-204ENST00000505397 SEPT2Q15019 361 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 VWA3BQ502W6 1294 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 RBM26Q5T8P6 1007 aaKnown RBP18.8■□□□□ 0.6
LIN54-204ENST00000505397 HPS3Q969F9 1004 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 VEZTQ9HBM0 779 aa18.8■□□□□ 0.6
LIN54-204ENST00000505397 MYMKA6NI61 221 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 LMAN1P49257 510 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 CIAPIN1Q6FI81 312 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 SLC39A2Q9NP94 309 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 BIN2Q9UBW5 565 aaPredicted RBP18.79■□□□□ 0.6
LIN54-204ENST00000505397 PDE2AO00408 941 aaPredicted RBP18.79■□□□□ 0.6
LIN54-204ENST00000505397 HOXA7P31268 230 aaPredicted RBP18.79■□□□□ 0.6
LIN54-204ENST00000505397 CYP27A1Q02318 531 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 CXCL9Q07325 125 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 SPDYE2Q495Y8 402 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 KCTD1Q719H9 257 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 FAM151AQ8WW52 585 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 ACBD3Q9H3P7 528 aa18.79■□□□□ 0.6
LIN54-204ENST00000505397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.79■□□□□ 0.6
LIN54-204ENST00000505397 ARFGEF1Q9Y6D6 1849 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 ACTN2P35609 894 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 EHHADHQ08426 723 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 KIF5AQ12840 1032 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 FOXR2Q6PJQ5 311 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 ADGRF4Q8IZF3 695 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 GUF1Q8N442 669 aaKnown RBP18.78■□□□□ 0.6
LIN54-204ENST00000505397 MKL1Q969V6 931 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 NDST4Q9H3R1 872 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 TMEM260Q9NX78 707 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 ARHGAP20Q9P2F6 1191 aa18.78■□□□□ 0.6
LIN54-204ENST00000505397 ZC3H4Q9UPT8 1303 aaKnown RBP18.78■□□□□ 0.6
LIN54-204ENST00000505397 TXKP42681 527 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms