RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PLA2G4DQ86XP0 818 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 GALNT15Q8N3T1 639 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 NKX2-3Q8TAU0 364 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 FAM71BQ8TC56 605 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 WRNIP1Q96S55 665 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 CNNM2Q9H8M5 875 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 ANGEL1Q9UNK9 670 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 SNX14Q9Y5W7 946 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 IGKV6D-41A0A0C4DH26 115 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 PRDM1O75626 825 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 ZKSCAN1P17029 563 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 SYT1P21579 422 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 JAG1P78504 1218 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 CUL3Q13618 768 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 KRT32Q14532 448 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 CERKLQ49MI3 558 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 LRRC8AQ8IWT6 810 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 ANKRD13AQ8IZ07 590 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 C2orf69Q8N8R5 385 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 ERMNQ8TAM6 284 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 JAKMIP2Q96AA8 810 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 YIPF3Q9GZM5 350 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 ZNF408Q9H9D4 720 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 SNCAIPQ9Y6H5 919 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 AKR1B1P15121 316 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 GUCY1A2P33402 732 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 NOVP48745 357 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 ZNF75DP51815 510 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 VGLL4Q14135 290 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 MOB2Q70IA6 237 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 BZW1Q7L1Q6 419 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 CEP57Q86XR8 500 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 DRC7Q8IY82 874 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 MB21D2Q8IYB1 491 aaPredicted RBP10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 SCYL3Q8IZE3 742 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 NEDD1Q8NHV4 660 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 FAM200AQ8TCP9 573 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 NACC2Q96BF6 587 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 RUFY1Q96T51 708 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 KRT23Q9C075 422 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 MKNK2Q9HBH9 465 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 ZBTB21Q9ULJ3 1066 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 TPX2Q9ULW0 747 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 TLL2Q9Y6L7 1015 aa10.64□□□□□ -0.71
PDLIM5-207ENST00000503974 TMEM88BA6NKF7 163 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 LIN7AO14910 233 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 STK10O94804 968 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 GDF11O95390 407 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 CCT5P48643 541 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 PRKG1Q13976 671 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 ABCB5Q2M3G0 1257 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 SHROOM1Q2M3G4 852 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 ADCK5Q3MIX3 580 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 SMUG1Q53HV7 270 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 TMEM179Q6ZVK1 233 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 SYCP3Q8IZU3 236 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 ZNF444Q8N0Y2 327 aaPredicted RBP10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 NCOA7Q8NI08 942 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 ESR2Q92731 530 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 HHIPL1Q96JK4 782 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 TM6SF1Q9BZW5 370 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 TCP11L1Q9NUJ3 509 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 TUBGCP4Q9UGJ1 667 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 PHF24Q9UPV7 400 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 PTPRFP10586 1907 aa10.63□□□□□ -0.71
PDLIM5-207ENST00000503974 A0A1B0GVG6 124 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 B4DLN1 442 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 B4E1Z4 1266 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 ASNSP08243 561 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 GNAT1P11488 350 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 IBSPP21815 317 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 CDC25BP30305 580 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 APLP1P51693 650 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 KRT72Q14CN4 511 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 BRD3Q15059 726 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 SNCBQ16143 134 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 FXNQ16595 210 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 STK11IPQ8N1F8 1099 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 UBAP1Q9NZ09 502 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 TRPC6Q9Y210 931 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 WDR19Q8NEZ3 1342 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 CCDC151A5D8V7 595 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 SPDYE5A6NIY4 337 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 UBE2Q2LH0YL09 131 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 SHOX2O60902 331 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 GH2P01242 217 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 LINGO3P0C6S8 592 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 HOXD10P28358 340 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 EVCP57679 992 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 ANTXR2P58335 489 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 SNW1Q13573 536 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 COL9A3Q14050 684 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 TTLL12Q14166 644 aaPredicted RBP10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 PLCB4Q15147 1175 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 CCDC144BQ3MJ40 725 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 GALNT17Q6IS24 598 aa10.62□□□□□ -0.71
PDLIM5-207ENST00000503974 HDXQ7Z353 690 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms